BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030590
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]   157   1e-36
emb|CBI32373.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002272499.1| PREDICTED: preprotein translocase subunit se...   156   2e-36
ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SC...   146   2e-33
ref|XP_002520756.1| protein translocase secy subunit, putative [...   145   3e-33

>emb|CAN77495.1| hypothetical protein VITISV_011897 [Vitis vinifera]
          Length = 1622

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/98 (79%), Positives = 86/98 (87%)
 Frame = -1

Query: 296  VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVIS 117
            V   HD + SE LQ  +K+F+NRFLNF RLGSV+NNAAE+FFKSEIRRRLFVTAVL+VIS
Sbjct: 935  VFGPHDVNNSETLQPRTKMFRNRFLNFARLGSVLNNAAETFFKSEIRRRLFVTAVLLVIS 994

Query: 116  RVGYFIPLPGFDRRLIPGDYLSFVSGSVDELGDSASEL 3
            RVGYFIPLPGFDRRL+P DYLSFVSGSVDELGD A EL
Sbjct: 995  RVGYFIPLPGFDRRLMPEDYLSFVSGSVDELGDFAGEL 1032


>emb|CBI32373.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/98 (79%), Positives = 86/98 (87%)
 Frame = -1

Query: 296 VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVIS 117
           V   H+ + SE LQ  +K+F+NRFLNF RLGSV+NNAAESFFKSEIRRRLFVTAVL+VIS
Sbjct: 145 VFGPHNVNNSETLQPRTKMFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVIS 204

Query: 116 RVGYFIPLPGFDRRLIPGDYLSFVSGSVDELGDSASEL 3
           RVGYFIPLPGFDRRL+P DYLSFVSGSVDELGD A EL
Sbjct: 205 RVGYFIPLPGFDRRLMPEDYLSFVSGSVDELGDFAGEL 242


>ref|XP_002272499.1| PREDICTED: preprotein translocase subunit secY-like [Vitis
           vinifera]
          Length = 668

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/98 (79%), Positives = 86/98 (87%)
 Frame = -1

Query: 296 VLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVIS 117
           V   H+ + SE LQ  +K+F+NRFLNF RLGSV+NNAAESFFKSEIRRRLFVTAVL+VIS
Sbjct: 200 VFGPHNVNNSETLQPRTKMFRNRFLNFARLGSVLNNAAESFFKSEIRRRLFVTAVLLVIS 259

Query: 116 RVGYFIPLPGFDRRLIPGDYLSFVSGSVDELGDSASEL 3
           RVGYFIPLPGFDRRL+P DYLSFVSGSVDELGD A EL
Sbjct: 260 RVGYFIPLPGFDRRLMPEDYLSFVSGSVDELGDFAGEL 297


>ref|XP_004140093.1| PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like
           [Cucumis sativus]
          Length = 494

 Score =  146 bits (368), Expect = 2e-33
 Identities = 79/122 (64%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
 Frame = -1

Query: 359 NRKRFTVSCMNIETTSTPET---GVLNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNN 189
           N K  +  C+++ET S         L S + +  +  +  S+ F+NRFLN VRL SV+NN
Sbjct: 2   NVKATSEQCLDLETFSQESNDGDAFLTSSNGTNFDIWKPKSRAFRNRFLNLVRLRSVLNN 61

Query: 188 AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPGDYLSFVSGSVDELGDSAS 9
           AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIP DYLSFVSGSVDELGD  +
Sbjct: 62  AAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYLSFVSGSVDELGDFTT 121

Query: 8   EL 3
           E+
Sbjct: 122 EM 123


>ref|XP_002520756.1| protein translocase secy subunit, putative [Ricinus communis]
           gi|223540141|gb|EEF41718.1| protein translocase secy
           subunit, putative [Ricinus communis]
          Length = 538

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/97 (75%), Positives = 85/97 (87%)
 Frame = -1

Query: 293 LNSHDFSTSEKLQTSSKLFKNRFLNFVRLGSVVNNAAESFFKSEIRRRLFVTAVLIVISR 114
           L+ +D S +  LQ+  K+++NRFL+FVR+ SV NNAAESFFKSEIRRRLFVTAVLIVISR
Sbjct: 38  LSLNDASGNITLQSQPKMYRNRFLDFVRISSVFNNAAESFFKSEIRRRLFVTAVLIVISR 97

Query: 113 VGYFIPLPGFDRRLIPGDYLSFVSGSVDELGDSASEL 3
           VGY+IPLPGFDRRLIP DYLSF+SGSVDELGD  +EL
Sbjct: 98  VGYYIPLPGFDRRLIPQDYLSFISGSVDELGDLTAEL 134