BLASTX nr result

ID: Coptis25_contig00030572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030572
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460340.1| hypothetical protein SORBIDRAFT_02g026680 [S...    99   4e-19
ref|XP_002510238.1| conserved hypothetical protein [Ricinus comm...    98   6e-19
ref|NP_001142366.1| EF hand family [Zea mays] gi|194708458|gb|AC...    98   8e-19
ref|XP_002282674.1| PREDICTED: calcium-binding protein CML37 [Vi...    97   1e-18
ref|XP_002510237.1| conserved hypothetical protein [Ricinus comm...    94   1e-17

>ref|XP_002460340.1| hypothetical protein SORBIDRAFT_02g026680 [Sorghum bicolor]
           gi|241923717|gb|EER96861.1| hypothetical protein
           SORBIDRAFT_02g026680 [Sorghum bicolor]
          Length = 99

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = +3

Query: 114 MTVSEFKSWLKQYDSDGDGRISKQELKEAINALGLWFAEWKGAMGVKYSDVNGNGYIDDS 293
           MTV EFK WL+++D+D DGRIS++EL+ A+ A+   F+ W+   G+ Y+D +G+GYIDDS
Sbjct: 20  MTVDEFKEWLRRFDTDRDGRISREELRRAMRAIRARFSGWRSKQGISYADTDGDGYIDDS 79

Query: 294 EIVYLVAFAQSEFGLKIVAY 353
           E+  L+ FAQ   GLKIVAY
Sbjct: 80  EVDGLIEFAQKNLGLKIVAY 99


>ref|XP_002510238.1| conserved hypothetical protein [Ricinus communis]
           gi|223550939|gb|EEF52425.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/79 (58%), Positives = 57/79 (72%)
 Frame = +3

Query: 114 MTVSEFKSWLKQYDSDGDGRISKQELKEAINALGLWFAEWKGAMGVKYSDVNGNGYIDDS 293
           MTV E K WL+ +D+D DGRISK+EL EAI   G WFA WKG  GVK +D NGNG++D +
Sbjct: 17  MTVEELKRWLRSFDTDRDGRISKEELAEAIRENGGWFARWKGKRGVKSADSNGNGFVDAN 76

Query: 294 EIVYLVAFAQSEFGLKIVA 350
           EI  LV FA+   G+KIV+
Sbjct: 77  EISNLVEFAKKHLGVKIVS 95


>ref|NP_001142366.1| EF hand family [Zea mays] gi|194708458|gb|ACF88313.1| unknown [Zea
           mays] gi|195622626|gb|ACG33143.1| EF hand family protein
           [Zea mays] gi|414589674|tpg|DAA40245.1| TPA: EF hand
           family [Zea mays]
          Length = 98

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/80 (53%), Positives = 58/80 (72%)
 Frame = +3

Query: 114 MTVSEFKSWLKQYDSDGDGRISKQELKEAINALGLWFAEWKGAMGVKYSDVNGNGYIDDS 293
           MTV EFK WL+++D+D DGRIS+ EL+ A+ A+   F  W+   G+ Y+D +G+GYIDDS
Sbjct: 19  MTVDEFKEWLRRFDTDQDGRISRDELRRALRAIRSRFTGWRSRQGISYADTDGDGYIDDS 78

Query: 294 EIVYLVAFAQSEFGLKIVAY 353
           E+  L+ FAQ   GLKIVAY
Sbjct: 79  EVDGLIEFAQKNLGLKIVAY 98


>ref|XP_002282674.1| PREDICTED: calcium-binding protein CML37 [Vitis vinifera]
           gi|147866711|emb|CAN78406.1| hypothetical protein
           VITISV_023175 [Vitis vinifera]
          Length = 97

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/80 (56%), Positives = 58/80 (72%)
 Frame = +3

Query: 114 MTVSEFKSWLKQYDSDGDGRISKQELKEAINALGLWFAEWKGAMGVKYSDVNGNGYIDDS 293
           MT+ EFK WLK+YD+D DGRISK EL++AI A G WF  WK   GV+ +DVNG+G+ID  
Sbjct: 18  MTMQEFKKWLKKYDADKDGRISKDELRDAIRATGGWFTRWKSRKGVRSADVNGDGFIDVH 77

Query: 294 EIVYLVAFAQSEFGLKIVAY 353
           EI  LV FA++   +KIV +
Sbjct: 78  EIENLVEFAKTHLRVKIVEF 97


>ref|XP_002510237.1| conserved hypothetical protein [Ricinus communis]
           gi|223550938|gb|EEF52424.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/79 (53%), Positives = 55/79 (69%)
 Frame = +3

Query: 114 MTVSEFKSWLKQYDSDGDGRISKQELKEAINALGLWFAEWKGAMGVKYSDVNGNGYIDDS 293
           MT+ E K WL  +D+D DGRISK+EL +AI   G WFA WKG  G+K +D NGNG++D S
Sbjct: 17  MTIEELKRWLISFDTDKDGRISKEELADAIRENGGWFARWKGRRGIKSADSNGNGFVDAS 76

Query: 294 EIVYLVAFAQSEFGLKIVA 350
           EI  L+ F Q   G+KI++
Sbjct: 77  EIDNLMGFVQKHLGVKIIS 95


Top