BLASTX nr result

ID: Coptis25_contig00030569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030569
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77536.1| hypothetical protein VITISV_030458 [Vitis vinifera]    58   7e-07
emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]    58   7e-07
emb|CAN71500.1| hypothetical protein VITISV_007955 [Vitis vinifera]    57   2e-06
gb|AAS98502.1| putative polyprotein [Oryza sativa Japonica Group]      57   2e-06
emb|CAN83395.1| hypothetical protein VITISV_021697 [Vitis vinifera]    55   5e-06

>emb|CAN77536.1| hypothetical protein VITISV_030458 [Vitis vinifera]
          Length = 284

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
 Frame = +2

Query: 5   YQADMKRKYDRKLYLKSFEPEDWVLSCKQKLIES------GKLSENWERPFIIDRPASKW 166
           YQ      Y+RK   ++F+    VL   +K+ E+      GKL  NWE P+I+ + +   
Sbjct: 202 YQQKTAAHYNRKARPRTFKVGTLVL---RKIFENTVENRVGKLQANWEGPYIVSKASESG 258

Query: 167 SYFLRRITGEKFAKPWNAFHLKMFY 241
           +Y L+++ G  F +PWN F+LK +Y
Sbjct: 259 TYHLQKLDGTPFLRPWNVFNLKQYY 283


>emb|CAN70849.1| hypothetical protein VITISV_039359 [Vitis vinifera]
          Length = 993

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +2

Query: 5    YQADMKRKYDRKLYLKSFEPEDWVLSCKQKLIES------GKLSENWERPFIIDRPASKW 166
            YQ      Y+RK+  +SF+    VL   +K+ E+      GK   NWERP+I+ + +   
Sbjct: 911  YQQRASAHYNRKVRPRSFKNGTLVL---RKVFENTVEMGVGKFQANWERPYIVSKASESG 967

Query: 167  SYFLRRITGEKFAKPWNAFHLKMFY 241
            +Y LR+I G    +PWN  +LK +Y
Sbjct: 968  AYHLRKINGTPLLRPWNVSNLKQYY 992


>emb|CAN71500.1| hypothetical protein VITISV_007955 [Vitis vinifera]
          Length = 914

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +2

Query: 5    YQADMKRKYDRKLYLKSFEPEDWVLSCKQKLIES------GKLSENWERPFIIDRPASKW 166
            YQ      Y+RK+  +SF+    VL   +K+ E+      GK   NWERP+I+ + +   
Sbjct: 832  YQQRASAHYNRKVRPRSFKNGTLVL---RKVFENTTEMGAGKFQANWERPYIVSKSSQSG 888

Query: 167  SYFLRRITGEKFAKPWNAFHLKMFY 241
            +Y L+++ G    KPWN  +LK +Y
Sbjct: 889  AYHLQKLDGTPLLKPWNVSNLKQYY 913


>gb|AAS98502.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1048

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/80 (36%), Positives = 40/80 (50%)
 Frame = +2

Query: 2    KYQADMKRKYDRKLYLKSFEPEDWVLSCKQKLIESGKLSENWERPFIIDRPASKWSYFLR 181
            KY       Y++K+  +   P   VL  K   IE GKL   WE P++I R +   S+ L 
Sbjct: 968  KYATSTSAAYNKKVRPRELMPGQLVLRKKANPIEVGKLESKWEGPYLIKRKSRTGSFRLA 1027

Query: 182  RITGEKFAKPWNAFHLKMFY 241
             + GE+F   WNA  L+ FY
Sbjct: 1028 TLEGEEFDHSWNAASLERFY 1047


>emb|CAN83395.1| hypothetical protein VITISV_021697 [Vitis vinifera]
          Length = 996

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
 Frame = +2

Query: 5    YQADMKRKYDRKLYLKSFEPEDWVLSCKQKLIES------GKLSENWERPFIIDRPASKW 166
            YQ      Y+RK+  +SF+    VL   +K+ E+      GK   NWE P+I+ + +S  
Sbjct: 914  YQQRASAHYNRKVRPRSFKNGTLVL---RKVFENTTEVGVGKFQANWEGPYIVSKASSNG 970

Query: 167  SYFLRRITGEKFAKPWNAFHLKMFY 241
            SY L+++ G    +PWN  +LK +Y
Sbjct: 971  SYHLQKLDGTPLLRPWNVSNLKQYY 995


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