BLASTX nr result
ID: Coptis25_contig00030561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00030561
(331 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD10836.1| P-glycoprotein [Solanum tuberosum] 160 1e-37
emb|CBI30138.3| unnamed protein product [Vitis vinifera] 159 2e-37
ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1... 159 2e-37
ref|XP_002519488.1| multidrug resistance protein 1, 2, putative ... 158 5e-37
ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1... 157 8e-37
>gb|AAD10836.1| P-glycoprotein [Solanum tuberosum]
Length = 1313
Score = 160 bits (404), Expect = 1e-37
Identities = 80/110 (72%), Positives = 92/110 (83%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LVRHHFTNGGLAIATMF+VMIGGLAL QSAPSM KI+ IDHKPS+DRNA
Sbjct: 322 LVRHHFTNGGLAIATMFAVMIGGLALGQSAPSMTAFAKARVAAAKIFRIIDHKPSVDRNA 381
Query: 150 ETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
+TGL LDT++G LELKNVEFSYPSRP+++ILN+F+L +P GKTIALVGSS
Sbjct: 382 KTGLELDTVSGQLELKNVEFSYPSRPEIKILNNFNLVVPAGKTIALVGSS 431
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRN- 154
LV+H ++ I +M+ A++ ++ +D K ++ +
Sbjct: 976 LVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFELLDRKTEVEPDD 1035
Query: 153 AETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
+ V D + G +E K+V+FSYP+RPDV I D +L GKT+ALVG S
Sbjct: 1036 PDATAVPDRLRGEVEFKHVDFSYPTRPDVSIFRDLNLRARAGKTLALVGPS 1086
>emb|CBI30138.3| unnamed protein product [Vitis vinifera]
Length = 999
Score = 159 bits (403), Expect = 2e-37
Identities = 79/110 (71%), Positives = 92/110 (83%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LVRHH+TNGGLAIATMFSVM+GGLAL QSAPSM KI+ IDHKP+I+RN
Sbjct: 253 LVRHHYTNGGLAIATMFSVMLGGLALGQSAPSMSAFAKAKVAAAKIFRIIDHKPNIERNG 312
Query: 150 ETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
ETGL L+++TG +ELKNV+FSYPSRP+VRIL+DFSLN+P GKTIALVGSS
Sbjct: 313 ETGLELESVTGQVELKNVDFSYPSRPEVRILSDFSLNVPAGKTIALVGSS 362
>ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1-like [Vitis vinifera]
Length = 1354
Score = 159 bits (403), Expect = 2e-37
Identities = 79/110 (71%), Positives = 92/110 (83%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LVRHH+TNGGLAIATMFSVM+GGLAL QSAPSM KI+ IDHKP+I+RN
Sbjct: 360 LVRHHYTNGGLAIATMFSVMLGGLALGQSAPSMSAFAKAKVAAAKIFRIIDHKPNIERNG 419
Query: 150 ETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
ETGL L+++TG +ELKNV+FSYPSRP+VRIL+DFSLN+P GKTIALVGSS
Sbjct: 420 ETGLELESVTGQVELKNVDFSYPSRPEVRILSDFSLNVPAGKTIALVGSS 469
Score = 61.2 bits (147), Expect = 8e-08
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LV+H ++ I +M+ A++ ++ +D K I+ +
Sbjct: 1014 LVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDD 1073
Query: 150 ETGL-VLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
+ V D + G +ELK+V+FSYPSRPDV + D L GKT+ALVG S
Sbjct: 1074 PDAIPVTDRLRGEVELKHVDFSYPSRPDVPVFRDLCLRARAGKTLALVGPS 1124
>ref|XP_002519488.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
gi|223541351|gb|EEF42902.1| multidrug resistance protein
1, 2, putative [Ricinus communis]
Length = 1352
Score = 158 bits (399), Expect = 5e-37
Identities = 78/110 (70%), Positives = 93/110 (84%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LVRHH+TNGGLAIATMF+VMIGGLAL QSAPSM KI+ IDHKP++DRN+
Sbjct: 358 LVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMGAFAKAKAAAAKIFRIIDHKPAVDRNS 417
Query: 150 ETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
E+GL LD++TG +ELKNV+FSYPSRPDV+ILN+F+LN+P GKTIALVGSS
Sbjct: 418 ESGLKLDSVTGLVELKNVDFSYPSRPDVKILNNFTLNVPAGKTIALVGSS 467
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRN- 154
LV+H ++ I +M+ A++ ++ +D K I+ +
Sbjct: 1012 LVKHEISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDD 1071
Query: 153 AETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
A+ V D + G +ELK+V+FSYP+RPDV I D +L GKT+ALVG S
Sbjct: 1072 ADATAVPDRLRGEVELKHVDFSYPTRPDVPIFRDLNLRARAGKTLALVGPS 1122
>ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
Length = 1342
Score = 157 bits (397), Expect = 8e-37
Identities = 79/110 (71%), Positives = 91/110 (82%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LVRHH TNGGLAIATMF+VMIGGL L QSAPSM KI+ IDHKP+IDRN+
Sbjct: 349 LVRHHATNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRIIDHKPNIDRNS 408
Query: 150 ETGLVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
E+G+ LDT+TG +ELKNV+FSYPSRP+V+ILNDFSLN+P GKTIALVGSS
Sbjct: 409 ESGIELDTVTGLVELKNVDFSYPSRPEVQILNDFSLNVPAGKTIALVGSS 458
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = -2
Query: 330 LVRHHFTNGGLAIATMFSVMIGGLALAQSAPSMQXXXXXXXXXXKIYCTIDHKPSIDRNA 151
LV+H ++ I +M+ A++ ++ +D + I+ +
Sbjct: 1003 LVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMRSVFELLDRRTEIEPDD 1062
Query: 150 ETG-LVLDTITGHLELKNVEFSYPSRPDVRILNDFSLNIPVGKTIALVGSS 1
+ LV D + G +ELK+V+FSYP+RPD+ + D SL GKT+ALVG S
Sbjct: 1063 QDATLVPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPS 1113