BLASTX nr result

ID: Coptis25_contig00030555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030555
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-16
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    89   6e-16

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = +2

Query: 281 SNPPLMMY-----LMFVEDNRGSIQNVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMD 445
           +N PL++      + F++D+   +  VP+W++ +NVP + W  KGLS +AS +G PL  D
Sbjct: 217 ANRPLVLKRWQPNMQFLKDD---LARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 446 KTTKGKQMLSFARVCIEISAEKDLPSSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHN 625
            TT  ++ LS+ARVC+EI A K L     ++        I  E+ W P  C +C +FGH 
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHT 333

Query: 626 KADC 637
            A C
Sbjct: 334 TALC 337


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = +2

Query: 281 SNPPLMMY-----LMFVEDNRGSIQNVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMD 445
           +N PL++      + F++D+   +  VP+W++ +NVP + W  KGLS +AS +G PL  D
Sbjct: 217 ANRPLVLKRWQPNMQFLKDD---LARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 446 KTTKGKQMLSFARVCIEISAEKDLPSSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHN 625
            TT  ++ LS+ARVC+EI A K L     ++        I  E+ W P  C +C +FGH 
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHT 333

Query: 626 KADC 637
            A C
Sbjct: 334 TALC 337



 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = +2

Query: 281  SNPPLMMY-----LMFVEDNRGSIQNVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMD 445
            +N PL++      + F++D+   +  VP+W++ +NVP + W  KGLS +AS +G PL  D
Sbjct: 1010 ANRPLVLKRWQPNMQFLKDD---LARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 1066

Query: 446  KTTKGKQMLSFARVCIEISAEKDLPSSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHN 625
             TT  ++ LS+ARVC+EI A K L     ++        I  E+ W P  C +C +FGH 
Sbjct: 1067 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHT 1126

Query: 626  KADC 637
             A C
Sbjct: 1127 TALC 1130


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
 Frame = +2

Query: 281 SNPPLMMY-----LMFVEDNRGSIQNVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMD 445
           +N PL++      + F++D+      VP+W++ +NVP + W  KGLS +AS +G PL  D
Sbjct: 217 ANRPLVLKRWQPNMQFLKDD---FARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHAD 273

Query: 446 KTTKGKQMLSFARVCIEISAEKDLPSSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHN 625
            TT  ++ LS+ARVC+EI A K L     ++        I  E+ W P  C +C +FGH 
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHT 333

Query: 626 KADC 637
            A C
Sbjct: 334 TALC 337


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
 Frame = +2

Query: 281 SNPPLMMY-----LMFVEDNRGSIQNVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMD 445
           +N PL++      + F++D+   +  VP+W+  +NVP + W  KGLS +AS +G PL  D
Sbjct: 217 ANMPLVLKRWQPNMQFLKDD---LARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHAD 273

Query: 446 KTTKGKQMLSFARVCIEISAEKDLPSSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHN 625
            TT  ++ LS+ARVC+EI A K L     ++        I  E+ W P  C +C +FGH 
Sbjct: 274 HTTFLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHT 333

Query: 626 KADC 637
           +  C
Sbjct: 334 RTLC 337


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 36/103 (34%), Positives = 65/103 (63%)
 Frame = +2

Query: 341 NVPIWIKFFNVPKQLWNKKGLSLLASTMGKPLFMDKTTKGKQMLSFARVCIEISAEKDLP 520
           +VP+WIK   +P +LW   GL ++AS +GKPL +D  TK +  LS+AR+C+E++ +  +P
Sbjct: 50  SVPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMP 109

Query: 521 SSLKIKVSTNKVNFIPLEFTWKPLICIDCQIFGHNKADCERQL 649
             + + +   +   +P+ + WKP  C  C  FGH+++ C +++
Sbjct: 110 IEITVNLRGEEF-IVPVTYEWKPRKCNLCHSFGHSQSTCPKKI 151


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