BLASTX nr result

ID: Coptis25_contig00030549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030549
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308547.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19
ref|XP_004141325.1| PREDICTED: uncharacterized protein LOC101210...    95   2e-17
ref|XP_002332339.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|AFO66519.1| putative ABC superfamily ATP binding cassette tra...    92   1e-16
ref|XP_002278242.1| PREDICTED: uncharacterized protein LOC100243...    91   3e-16

>ref|XP_002308547.1| predicted protein [Populus trichocarpa] gi|222854523|gb|EEE92070.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  100 bits (248), Expect = 4e-19
 Identities = 57/112 (50%), Positives = 66/112 (58%)
 Frame = -3

Query: 696 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXX 517
           GLKHGRAIV+STCAAVASIVTGVLAGMLALGE+LPS+P  RF                  
Sbjct: 214 GLKHGRAIVLSTCAAVASIVTGVLAGMLALGERLPSAPAARFSLLLGWLLIVVGVILLVS 273

Query: 516 SARLLQHLPWPAKRFLSGVEKNXXXXXXXXXXXXXXXXSTVIQASTLHHLIS 361
           S  LL+HLP P + F S  ++N                + VI A+TLHHLIS
Sbjct: 274 STWLLRHLPRPLRHFTSSADRNFSLSRSGSLRLKDPNPTAVIHAATLHHLIS 325


>ref|XP_004141325.1| PREDICTED: uncharacterized protein LOC101210517 [Cucumis sativus]
           gi|449486673|ref|XP_004157364.1| PREDICTED:
           uncharacterized protein LOC101228106 [Cucumis sativus]
          Length = 344

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
 Frame = -3

Query: 696 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXX 517
           GLKHGRAIVVSTCAAVASIVTGVLAGMLALGE+LPSSP GR                   
Sbjct: 225 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEELPSSPTGRLFLLLGWLLIIIGVILLVS 284

Query: 516 SARLLQHLPWPAKRF-LSGVEKNXXXXXXXXXXXXXXXXSTVIQASTLHHLIS 361
           S+RL++ L W  +RF  SGV++N                S +IQ +TL +L+S
Sbjct: 285 SSRLIRRLTWLYRRFKRSGVDRNFGHRSGSAVRLRDSSPSAIIQTTTLQNLLS 337


>ref|XP_002332339.1| predicted protein [Populus trichocarpa] gi|222831906|gb|EEE70383.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 59/113 (52%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = -3

Query: 696 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXX 517
           GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPS+P  RF                  
Sbjct: 242 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSAPTARFSLLLGWLFIVVGVILLVS 301

Query: 516 SARLLQHLPWPAKRFLS-GVEKNXXXXXXXXXXXXXXXXSTVIQASTLHHLIS 361
           S  LL+HL  P +RF+   V++N                + VI A+TLHHLIS
Sbjct: 302 STWLLRHL--PLRRFIRINVDRNFSLSRSGSLRLKDSNPTAVIHAATLHHLIS 352


>gb|AFO66519.1| putative ABC superfamily ATP binding cassette transporter [Brassica
           napus]
          Length = 356

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 59/119 (49%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = -3

Query: 696 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXX 517
           GLKHGRAIVVSTCAAVASIVTGV+AGM ALGE+LP+SP GR                   
Sbjct: 237 GLKHGRAIVVSTCAAVASIVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVT 296

Query: 516 SARLLQHLPWPAKRF-LSGVEKNXXXXXXXXXXXXXXXXSTVIQASTLHHLISHV-KEK 346
           S+RL++HLP   +R   + VE+                 S VIQA+TLHHL+S   KEK
Sbjct: 297 SSRLIRHLPRSFRRSRQTSVERGFNIRRTTSHTPKDTNPSAVIQAATLHHLLSSASKEK 355


>ref|XP_002278242.1| PREDICTED: uncharacterized protein LOC100243991 [Vitis vinifera]
           gi|296081636|emb|CBI20641.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 59/116 (50%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = -3

Query: 696 GLKHGRAIVVSTCAAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXX 517
           GLK GRAIVVSTCAAVASI+TGVLAGMLALGEQLPS+P  R                   
Sbjct: 225 GLKDGRAIVVSTCAAVASILTGVLAGMLALGEQLPSAPDARLSLLFGWLLIIIGVILLVS 284

Query: 516 SARLLQHLPWPAKRFL-SGVEKNXXXXXXXXXXXXXXXXST---VIQASTLHHLIS 361
           S  L++HLP P + ++ SGVE+N                S+   VIQASTLHHLI+
Sbjct: 285 STWLVRHLPRPLRHYVQSGVERNFGVKQSGSRSGTRVRDSSPSAVIQASTLHHLIT 340


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