BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030535
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39176.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi...   226   4e-57
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]   226   4e-57
ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containi...   199   6e-49

>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  226 bits (577), Expect = 4e-57
 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%)
 Frame = -3

Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443
           A++FAFL       G+ T  +  +++     ++A++ S+   +    F H+T KFLR FR
Sbjct: 65  AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124

Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263
             LN++LV++VL LV N  + V FFIWA  QIGY HT   Y ALLE+L   G N R+P+ 
Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183

Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83
           FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 82  KADRLDSAYLIHGEMSTSGFSMDGHTL 2
           +ADRLD+AYL+H EMS SGF+MDG+TL
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270


>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  226 bits (577), Expect = 4e-57
 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%)
 Frame = -3

Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443
           A++FAFL       G+ T  +  +++     ++A++ S+   +    F H+T KFLR FR
Sbjct: 65  AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124

Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263
             LN++LV++VL LV N  + V FFIWA  QIGY HT   Y ALLE+L   G N R+P+ 
Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183

Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83
           FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 82  KADRLDSAYLIHGEMSTSGFSMDGHTL 2
           +ADRLD+AYL+H EMS SGF+MDG+TL
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270


>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  226 bits (577), Expect = 4e-57
 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%)
 Frame = -3

Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443
           A++FAFL       G+ T  +  +++     ++A++ S+   +    F H+T KFLR FR
Sbjct: 65  AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124

Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263
             LN++LV++VL LV N  + V FFIWA  QIGY HT   Y ALLE+L   G N R+P+ 
Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183

Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83
           FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 82  KADRLDSAYLIHGEMSTSGFSMDGHTL 2
           +ADRLD+AYL+H EMS SGF+MDG+TL
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270


>ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  211 bits (536), Expect = 2e-52
 Identities = 113/206 (54%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
 Frame = -3

Query: 607 PVSAQDFAFL---LKGNKTPPNSKQAILISNAIITSNTTSHNDARFTHETDKFLRHFRGS 437
           P  +Q +AFL   L  + T   S  A+ ISNAI T          F  ET  FLR FRG 
Sbjct: 47  PDLSQHYAFLRTSLLNSATTQTSNDALSISNAIRTG---------FGAETQNFLRQFRGR 97

Query: 436 LNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNG-DNTRLPDSF 260
           L++ LV+EV+ LV +    V FF+WA+ QIGY+HT   Y AL+E+L  N  +N R+   F
Sbjct: 98  LSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKF 157

Query: 259 LQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFLK 80
           L +IR+DD ++L KLLN LIQKCCRNG+WN ALEELGRLKDFGYK S +TYNAL+ VFL+
Sbjct: 158 LMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLR 217

Query: 79  ADRLDSAYLIHGEMSTSGFSMDGHTL 2
           AD+LD+A+L+H EMS SGF MDG TL
Sbjct: 218 ADKLDTAFLVHREMSNSGFRMDGCTL 243


>ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  199 bits (506), Expect = 6e-49
 Identities = 103/182 (56%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
 Frame = -3

Query: 544 QAILISN-AIITSNTTSHNDARFTHETDKFLRHFRGSLNQSLVIEVLKLVGNSRMAVTFF 368
           Q + ISN A +  +   + D  F  +T   LR FR  LN  LV+E+L  + +  + V FF
Sbjct: 99  QTVKISNEAFLILDAVRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFF 158

Query: 367 IWAAAQIGYTHTERAYEALLEILESNGDNTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 188
           +WA  QIGY HT   Y ALL++ E  G   R+P+ FL+EIR DD +VL KLLNVLI+KCC
Sbjct: 159 LWAGRQIGYDHTPAVYIALLDVFE-RGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217

Query: 187 RNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFLKADRLDSAYLIHGEMSTSGFSMDGH 8
           RNGLWN ALEELGRLKDFGYKP+R TYNALV VFL+AD+LD+A L+H EMS  G SMD  
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 7   TL 2
           TL
Sbjct: 278 TL 279