BLASTX nr result
ID: Coptis25_contig00030535
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030535 (819 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI39176.3| unnamed protein product [Vitis vinifera] 226 4e-57 ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi... 226 4e-57 emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera] 226 4e-57 ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containi... 211 2e-52 ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containi... 199 6e-49 >emb|CBI39176.3| unnamed protein product [Vitis vinifera] Length = 996 Score = 226 bits (577), Expect = 4e-57 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%) Frame = -3 Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443 A++FAFL G+ T + +++ ++A++ S+ + F H+T KFLR FR Sbjct: 65 AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124 Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263 LN++LV++VL LV N + V FFIWA QIGY HT Y ALLE+L G N R+P+ Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183 Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83 FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243 Query: 82 KADRLDSAYLIHGEMSTSGFSMDGHTL 2 +ADRLD+AYL+H EMS SGF+MDG+TL Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270 >ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like [Vitis vinifera] Length = 1045 Score = 226 bits (577), Expect = 4e-57 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%) Frame = -3 Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443 A++FAFL G+ T + +++ ++A++ S+ + F H+T KFLR FR Sbjct: 65 AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124 Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263 LN++LV++VL LV N + V FFIWA QIGY HT Y ALLE+L G N R+P+ Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183 Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83 FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243 Query: 82 KADRLDSAYLIHGEMSTSGFSMDGHTL 2 +ADRLD+AYL+H EMS SGF+MDG+TL Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270 >emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera] Length = 1010 Score = 226 bits (577), Expect = 4e-57 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 8/207 (3%) Frame = -3 Query: 598 AQDFAFLLK-----GNKTPPNSKQAI---LISNAIITSNTTSHNDARFTHETDKFLRHFR 443 A++FAFL G+ T + +++ ++A++ S+ + F H+T KFLR FR Sbjct: 65 AEEFAFLRDSLLETGSDTGASVNKSVSGRCSNDAVLISDVIRNTGDGFGHKTQKFLRQFR 124 Query: 442 GSLNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNGDNTRLPDS 263 LN++LV++VL LV N + V FFIWA QIGY HT Y ALLE+L G N R+P+ Sbjct: 125 EKLNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGG-NDRVPEQ 183 Query: 262 FLQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFL 83 FL+EIR++D ++L KLLNVLI+KCCRNGLWN ALEELGRLKD GYKPSR TYNALV VFL Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243 Query: 82 KADRLDSAYLIHGEMSTSGFSMDGHTL 2 +ADRLD+AYL+H EMS SGF+MDG+TL Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTL 270 >ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like [Glycine max] Length = 1024 Score = 211 bits (536), Expect = 2e-52 Identities = 113/206 (54%), Positives = 141/206 (68%), Gaps = 4/206 (1%) Frame = -3 Query: 607 PVSAQDFAFL---LKGNKTPPNSKQAILISNAIITSNTTSHNDARFTHETDKFLRHFRGS 437 P +Q +AFL L + T S A+ ISNAI T F ET FLR FRG Sbjct: 47 PDLSQHYAFLRTSLLNSATTQTSNDALSISNAIRTG---------FGAETQNFLRQFRGR 97 Query: 436 LNQSLVIEVLKLVGNSRMAVTFFIWAAAQIGYTHTERAYEALLEILESNG-DNTRLPDSF 260 L++ LV+EV+ LV + V FF+WA+ QIGY+HT Y AL+E+L N +N R+ F Sbjct: 98 LSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKF 157 Query: 259 LQEIRNDDTQVLAKLLNVLIQKCCRNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFLK 80 L +IR+DD ++L KLLN LIQKCCRNG+WN ALEELGRLKDFGYK S +TYNAL+ VFL+ Sbjct: 158 LMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLR 217 Query: 79 ADRLDSAYLIHGEMSTSGFSMDGHTL 2 AD+LD+A+L+H EMS SGF MDG TL Sbjct: 218 ADKLDTAFLVHREMSNSGFRMDGCTL 243 >ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like [Cucumis sativus] Length = 1000 Score = 199 bits (506), Expect = 6e-49 Identities = 103/182 (56%), Positives = 126/182 (69%), Gaps = 1/182 (0%) Frame = -3 Query: 544 QAILISN-AIITSNTTSHNDARFTHETDKFLRHFRGSLNQSLVIEVLKLVGNSRMAVTFF 368 Q + ISN A + + + D F +T LR FR LN LV+E+L + + + V FF Sbjct: 99 QTVKISNEAFLILDAVRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFF 158 Query: 367 IWAAAQIGYTHTERAYEALLEILESNGDNTRLPDSFLQEIRNDDTQVLAKLLNVLIQKCC 188 +WA QIGY HT Y ALL++ E G R+P+ FL+EIR DD +VL KLLNVLI+KCC Sbjct: 159 LWAGRQIGYDHTPAVYIALLDVFE-RGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCC 217 Query: 187 RNGLWNAALEELGRLKDFGYKPSRSTYNALVLVFLKADRLDSAYLIHGEMSTSGFSMDGH 8 RNGLWN ALEELGRLKDFGYKP+R TYNALV VFL+AD+LD+A L+H EMS G SMD Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277 Query: 7 TL 2 TL Sbjct: 278 TL 279