BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030531
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methylt...   384   e-104
emb|CBI40848.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methylt...   365   1e-98
ref|XP_003628884.1| RNA methyltransferase-like protein [Medicago...   361   1e-97
ref|NP_195515.2| tRNA/rRNA methyltransferase (SpoU) family prote...   360   3e-97

>ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like
            [Vitis vinifera]
          Length = 459

 Score =  384 bits (985), Expect = e-104
 Identities = 195/282 (69%), Positives = 232/282 (82%), Gaps = 7/282 (2%)
 Frame = -2

Query: 825  SNVEKITSPSNPFVKHCIKLRQSSSFRHSQASVLVVGTTPIREITRFQDSSV-----IQC 661
            S+V+ ITSPSNPFVKHC KLR SSS+R+S  S LVVGTTPIREI +FQ S+      + C
Sbjct: 170  SHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEMDC 229

Query: 660  LLVLDGAEVP--LDDSTLRIVRVSSMVMKKLCGVQSIDSIDAVALMRIPNSFCYMDDDDH 487
            LL+LD AE+P  LDD ++R+VRVSSMVMKKL G+QS +S++A+ALMRIP SF  ++DD +
Sbjct: 230  LLILDKAEIPEGLDDFSVRLVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTY 289

Query: 486  GEENCRCWFPTPHRVLVLDGIQDPGNLGTLLRSAVAFRWSGAFLLPGCCDPFNDKALRAS 307
             E++CR WF +PHR+LVLD IQDPGNLGTLLRSA+AFRW G FLL GCCDPFN KALRAS
Sbjct: 290  -EKDCRRWFQSPHRILVLDRIQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRAS 348

Query: 306  RGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQQLADSLVEKHVCL 127
            RGASFQLPIVSG+W  LE L+NEFQMKM+AGHP+SN   K  S LSQ LADSL +  +CL
Sbjct: 349  RGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLCL 408

Query: 126  VLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILLF 1
            VLGSEG GLSE+S + CEL+SIPM+G+FESLNVSVAGGI L+
Sbjct: 409  VLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFLY 450


>emb|CBI40848.3| unnamed protein product [Vitis vinifera]
          Length = 1306

 Score =  384 bits (985), Expect = e-104
 Identities = 195/282 (69%), Positives = 232/282 (82%), Gaps = 7/282 (2%)
 Frame = -2

Query: 825  SNVEKITSPSNPFVKHCIKLRQSSSFRHSQASVLVVGTTPIREITRFQDSSV-----IQC 661
            S+V+ ITSPSNPFVKHC KLR SSS+R+S  S LVVGTTPIREI +FQ S+      + C
Sbjct: 1008 SHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEMDC 1067

Query: 660  LLVLDGAEVP--LDDSTLRIVRVSSMVMKKLCGVQSIDSIDAVALMRIPNSFCYMDDDDH 487
            LL+LD AE+P  LDD ++R+VRVSSMVMKKL G+QS +S++A+ALMRIP SF  ++DD +
Sbjct: 1068 LLILDKAEIPEGLDDFSVRLVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTY 1127

Query: 486  GEENCRCWFPTPHRVLVLDGIQDPGNLGTLLRSAVAFRWSGAFLLPGCCDPFNDKALRAS 307
             E++CR WF +PHR+LVLD IQDPGNLGTLLRSA+AFRW G FLL GCCDPFN KALRAS
Sbjct: 1128 -EKDCRRWFQSPHRILVLDRIQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRAS 1186

Query: 306  RGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQQLADSLVEKHVCL 127
            RGASFQLPIVSG+W  LE L+NEFQMKM+AGHP+SN   K  S LSQ LADSL +  +CL
Sbjct: 1187 RGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLCL 1246

Query: 126  VLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILLF 1
            VLGSEG GLSE+S + CEL+SIPM+G+FESLNVSVAGGI L+
Sbjct: 1247 VLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFLY 1288


>ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
           [Cucumis sativus]
          Length = 328

 Score =  365 bits (936), Expect = 1e-98
 Identities = 189/282 (67%), Positives = 230/282 (81%), Gaps = 7/282 (2%)
 Frame = -2

Query: 825 SNVEKITSPSNPFVKHCIKLRQSSSFRHSQASVLVVGTTPIREITRFQDS-----SVIQC 661
           S+V+ ITS SNPFVKHC+KLR SSS+RH   SV+VVG TPIREI +FQ+S       ++C
Sbjct: 42  SHVKAITSISNPFVKHCVKLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGVTCTLEC 101

Query: 660 LLVLDGAEVP--LDDSTLRIVRVSSMVMKKLCGVQSIDSIDAVALMRIPNSFCYMDDDDH 487
           LL+LD  EVP  L + T+RIVRVSS VMKKL G+QS +SIDA+ALMRIP SFC +D ++ 
Sbjct: 102 LLLLDEVEVPEGLVNLTVRIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEK 161

Query: 486 GEENCRCWFPTPHRVLVLDGIQDPGNLGTLLRSAVAFRWSGAFLLPGCCDPFNDKALRAS 307
            E + + WFP+PHR+LVL+GIQDPGNLGTL+RSA+AF+W+G FLLPGCCDPFN+KALRAS
Sbjct: 162 -EVDFKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGIFLLPGCCDPFNEKALRAS 220

Query: 306 RGASFQLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQQLADSLVEKHVCL 127
           RGASFQLPIVSGTW  LE  + EF+MKMLAGHPESN+  K  S+LSQQ ++SL +  +CL
Sbjct: 221 RGASFQLPIVSGTWNHLEVFKKEFEMKMLAGHPESNE-PKPVSVLSQQFSNSLKDFPLCL 279

Query: 126 VLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILLF 1
           VLG EG GLSE+S + CEL+SIPM+G FESLNVSVAGGI L+
Sbjct: 280 VLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFLY 321


>ref|XP_003628884.1| RNA methyltransferase-like protein [Medicago truncatula]
           gi|355522906|gb|AET03360.1| RNA methyltransferase-like
           protein [Medicago truncatula]
          Length = 638

 Score =  361 bits (927), Expect = 1e-97
 Identities = 184/277 (66%), Positives = 222/277 (80%), Gaps = 7/277 (2%)
 Frame = -2

Query: 810 ITSPSNPFVKHCIKLRQSSSFRHSQASVLVVGTTPIREITRFQDSS-----VIQCLLVLD 646
           ITS SNPFVKHC+KLR +SS+R S  SVLVVGTTPIREI RFQ+SS      + CL++ D
Sbjct: 50  ITSSSNPFVKHCLKLRNNSSYRRSHGSVLVVGTTPIREIYRFQESSQNKNVTMDCLILPD 109

Query: 645 GAEVP--LDDSTLRIVRVSSMVMKKLCGVQSIDSIDAVALMRIPNSFCYMDDDDHGEENC 472
            AE+P  LD+S   IV VSS VM+K+ G+QS DSIDA+ALM+IP SF  +DDD   ++NC
Sbjct: 110 KAEIPNGLDESADSIVHVSSTVMRKISGLQSTDSIDAIALMKIPASFSNLDDD---QKNC 166

Query: 471 RCWFPTPHRVLVLDGIQDPGNLGTLLRSAVAFRWSGAFLLPGCCDPFNDKALRASRGASF 292
           + WFP+ HR+LVLDGIQDPGNLGTLLRSAVAFRW G FLLPGCCDPFN+KALRASRGASF
Sbjct: 167 QKWFPSAHRILVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASF 226

Query: 291 QLPIVSGTWAQLENLRNEFQMKMLAGHPESNDGMKGCSLLSQQLADSLVEKHVCLVLGSE 112
           QLPIVSG+W  LE+L+ E QMK+LAGHP+    +K    LSQ   DS+++  +CLVLGSE
Sbjct: 227 QLPIVSGSWNHLESLKEESQMKLLAGHPQHEGLIKPVFSLSQSFCDSILDTPLCLVLGSE 286

Query: 111 GQGLSEQSERACELISIPMSGDFESLNVSVAGGILLF 1
           G GLSE+S +ACEL+SI M+G++ESLNVSVAGGI L+
Sbjct: 287 GSGLSEKSLQACELVSIAMTGEYESLNVSVAGGIFLY 323


>ref|NP_195515.2| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|26450142|dbj|BAC42190.1| unknown protein
           [Arabidopsis thaliana] gi|90093284|gb|ABD85155.1|
           At4g38020 [Arabidopsis thaliana]
           gi|332661464|gb|AEE86864.1| tRNA/rRNA methyltransferase
           (SpoU) family protein [Arabidopsis thaliana]
          Length = 352

 Score =  360 bits (923), Expect = 3e-97
 Identities = 183/283 (64%), Positives = 223/283 (78%), Gaps = 8/283 (2%)
 Frame = -2

Query: 825 SNVEKITSPSNPFVKHCIKLRQSSSFRHSQASVLVVGTTPIREITRFQDS-----SVIQC 661
           S+V  ITS +NPFVKHC+KLRQSSS+RH+  SVLVVGT PIRE+  FQ +     + I+C
Sbjct: 64  SHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQGMTTEIEC 123

Query: 660 LLVLDGAEVP--LDDSTLRIVRVSSMVMKKLCGVQSIDSIDAVALMRIPNSFCYMDDDDH 487
           LL+ + A++P  L+  ++RIVRVSS+VMKKL GVQS +S++A+ALMRIP+SF  + DD  
Sbjct: 124 LLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFTDLKDDKD 183

Query: 486 GEENCRCWFPTPHRVLVLDGIQDPGNLGTLLRSAVAFRWSGAFLLPGCCDPFNDKALRAS 307
              +C  WFP+ HRVLVLD IQDPGNLGTL+RSA+AF W GAFLLPGCCDP+NDKALRAS
Sbjct: 184 IITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYNDKALRAS 243

Query: 306 RGASFQLPIVSGTWAQLENLRNEFQMKMLAGHP-ESNDGMKGCSLLSQQLADSLVEKHVC 130
           RGASFQLPIVSG W  L+ L NEFQMK+LAGHP  +   +K  S LS + A SL EK +C
Sbjct: 244 RGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLSVEFAQSLAEKPLC 303

Query: 129 LVLGSEGQGLSEQSERACELISIPMSGDFESLNVSVAGGILLF 1
           L+LGSEG GLSEQ+ + C L+SIPM+GDFESLNVSVAGGI L+
Sbjct: 304 LILGSEGNGLSEQARKVCVLVSIPMAGDFESLNVSVAGGIFLY 346