BLASTX nr result

ID: Coptis25_contig00030527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030527
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]   128   2e-27
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...   122   2e-25
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...   120   6e-25
emb|CBI37809.3| unnamed protein product [Vitis vinifera]              109   1e-21
gb|ABE91936.1| Ovarian tumour, otubain [Medicago truncatula]          103   4e-20

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score =  128 bits (321), Expect = 2e-27
 Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
 Frame = +3

Query: 399  FPDILQP*ILDIEDPKGDGNCGFRALAMALGYGEDAWVQVRVNLISELHASKEEYIRMFG 578
            FP+ LQP I+ ++D   DGNCGFR +A A+G GE+ W QVR +++ EL    +EY ++F 
Sbjct: 575  FPEGLQPYIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWDEYAQLFR 634

Query: 579  HE-NVTRCEGSLLHFKGDAPEEKWMLLPEHGYLAASKYSVAIVYFSMAGCHTFLPLKSAF 755
                V      L HF+  A  ++WM +P+ G++ AS+Y+V +VY SM  C TFLPL+SA 
Sbjct: 635  DPIRVDELIHXLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAP 694

Query: 756  NENDY-KVIGIGRV-PNHFLKLNLEANCPMPKIASFWEKHHREIANEW 893
                  +V+ IG +  NHF+++ +    PMP +A+ W K     A  W
Sbjct: 695  TPLPMRRVLSIGFINDNHFVEILMTTGAPMPPVANSWSKSCYPCAEGW 742


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score =  122 bits (305), Expect = 2e-25
 Identities = 64/178 (35%), Positives = 103/178 (57%), Gaps = 3/178 (1%)
 Frame = +3

Query: 390  LDYFPDILQP*ILDIEDPKGDGNCGFRALAMALGYGEDAWVQVRVNLISELHASKEEYIR 569
            +D FP  + P I DI D KGD NCG+RA+A  LG GE++W  VR +LI EL   ++ Y +
Sbjct: 679  MDQFPVEIHPFIEDIIDVKGDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAK 738

Query: 570  MFGHENVTRCEGSLLHFKGDAPEEKWMLLPEHGYLAASKYSVAIVYFSMAGCHTFLPLKS 749
            +FG  +        L+    A    WM +P+ GY+ AS+Y+V +V  S+  C TF PL+ 
Sbjct: 739  LFGSNDRVAELRQSLYVGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRG 798

Query: 750  --AFNENDYKVIGIGRVPN-HFLKLNLEANCPMPKIASFWEKHHREIANEWKSYFMSR 914
                +++ Y++I IG V   HF+++ L+A+  +P  A  W ++    +  W++ ++SR
Sbjct: 799  RPPLSQSSYRLISIGFVHKCHFVQVVLKADSVLPPTALQWSRYCNAESRSWETSYVSR 856


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score =  120 bits (300), Expect = 6e-25
 Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 3/178 (1%)
 Frame = +3

Query: 390  LDYFPDILQP*ILDIEDPKGDGNCGFRALAMALGYGEDAWVQVRVNLISELHASKEEYIR 569
            +D FP  + P I DI D KGD NCG+RA+A  LG GE++W  VR +LI EL   ++ Y +
Sbjct: 680  MDQFPVEIHPFIEDIIDVKGDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAK 739

Query: 570  MFGHENVTRCEGSLLHFKGDAPEEKWMLLPEHGYLAASKYSVAIVYFSMAGCHTFLPLKS 749
            +FG  +        L+    A    WM +P+ GY+ AS+Y+V +V  S+  C TF PL+ 
Sbjct: 740  LFGSNDRVAELRKSLYVGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRG 799

Query: 750  --AFNENDYKVIGIGRVPN-HFLKLNLEANCPMPKIASFWEKHHREIANEWKSYFMSR 914
                +++ +++I IG V   HF+++ L+A+  +P  A  W ++    +  W++ ++SR
Sbjct: 800  RPPLSQSSHRLISIGFVHKCHFVQVVLKADSAIPPTALQWSRYCNAESRSWETSYVSR 857


>emb|CBI37809.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  109 bits (272), Expect = 1e-21
 Identities = 59/141 (41%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
 Frame = +3

Query: 399 FPDILQP*ILDIEDPKGDGNCGFRALAMALGYGEDAWVQVRVNLISELHASKEEYIRMFG 578
           FP+ LQP I+ ++D   DGNCGFR +A A+G GE+ W QVR +++ EL     EY ++F 
Sbjct: 477 FPEGLQPYIMHVKDVAADGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWAEYAQLFR 536

Query: 579 HE-NVTRCEGSLLHFKGDAPEEKWMLLPEHGYLAASKYSVAIVYFSMAGCHTFLPLKSAF 755
               V      L HF+  A  ++WM +P+ G++ AS+Y+V +VY SM  C TFLPL+SA 
Sbjct: 537 DPIRVDELIHVLEHFQSPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAP 596

Query: 756 NENDY-KVIGIGRV-PNHFLK 812
                 +V+ IG +  NHF++
Sbjct: 597 TPLPMRRVLSIGFINDNHFVE 617


>gb|ABE91936.1| Ovarian tumour, otubain [Medicago truncatula]
          Length = 985

 Score =  103 bits (258), Expect = 4e-20
 Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
 Frame = +3

Query: 384  RYLDYFPDILQP*ILDIEDPKGDGNCGFRALAMALGYGEDAWVQVRVNLISELHASKEEY 563
            R +DY P  + P I  + D  GDG+CGFRA+A  +G  E   + +R +LI EL   +++Y
Sbjct: 737  RPIDYMPRFMVPFIEKVVDVIGDGHCGFRAIAEFMGLTEKNHLMIRTHLIQELMDHRDDY 796

Query: 564  IRMFGHENVTRCEGSLLHFKGDAPE-----EKWMLLPEHGYLAASKYSVAIVYFS---MA 719
            + +F  E+      + LH   +        +KW+  P+ G++ A+ Y + +V  +   + 
Sbjct: 797  VEVFAGEDRYNYILNGLHPPANTKTCAHLVDKWLTFPDMGHIVANYYKMCVVVLTNLEVG 856

Query: 720  GCHTFLPLKSAFNENDYK--VIGIGRVPNHFLKLNLEANCPMPKIASFWEKHHREIANEW 893
               +F PL+      + K  ++ +G +PNHF+ ++L+  CP+P +++ W  H +E A  W
Sbjct: 857  KSESFFPLRGPPPPGNQKTPILCLGAIPNHFVLISLKNGCPLPPLSTEWHNHKKEDAVTW 916

Query: 894  KSYFMSR 914
            +  ++ R
Sbjct: 917  EDEYLDR 923


Top