BLASTX nr result

ID: Coptis25_contig00030518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030518
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272595.1| PREDICTED: uncharacterized protein LOC100265...   246   2e-63
emb|CBI21319.3| unnamed protein product [Vitis vinifera]              238   8e-61
ref|XP_002512897.1| conserved hypothetical protein [Ricinus comm...   216   4e-54
ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|2...   213   3e-53
ref|NP_001235830.1| uncharacterized protein LOC100500029 precurs...   213   4e-53

>ref|XP_002272595.1| PREDICTED: uncharacterized protein LOC100265200 [Vitis vinifera]
          Length = 180

 Score =  246 bits (629), Expect = 2e-63
 Identities = 120/178 (67%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
 Frame = +1

Query: 43  WSGASPQSHFAAMDPRVLFILVSLFTQSLS-KESPSPRTTSNIAVMGFVYCDICSNNTFS 219
           W G +  S F  M P +LF+L SLF QSL  K  P     S+I VMG VYCDICSNNTFS
Sbjct: 2   WKGLATLSRFFTMAPVILFLLSSLFAQSLFLKVEPEKPHNSHITVMGIVYCDICSNNTFS 61

Query: 220 RHSYFLPGVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSV 399
           R+SYFLPGV+V+I CKF AISP TTEQI+FSV RTTDKFG+YKLEIPSV+GI+CA + ++
Sbjct: 62  RNSYFLPGVEVNIECKFQAISPRTTEQISFSVTRTTDKFGVYKLEIPSVEGIECASDSAI 121

Query: 400 QSSCQASLVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 573
           +SSCQASL+ ++SS CN+PG KTT+D++A KSKQANVC YSLNALNYRP +RDT LCG
Sbjct: 122 ESSCQASLMWSSSSSCNVPGHKTTTDEIAIKSKQANVCIYSLNALNYRPSERDTALCG 179


>emb|CBI21319.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  238 bits (607), Expect = 8e-61
 Identities = 116/166 (69%), Positives = 138/166 (83%), Gaps = 1/166 (0%)
 Frame = +1

Query: 79  MDPRVLFILVSLFTQSLS-KESPSPRTTSNIAVMGFVYCDICSNNTFSRHSYFLPGVKVH 255
           M P +LF+L SLF QSL  K  P     S+I VMG VYCDICSNNTFSR+SYFLPGV+V+
Sbjct: 1   MAPVILFLLSSLFAQSLFLKVEPEKPHNSHITVMGIVYCDICSNNTFSRNSYFLPGVEVN 60

Query: 256 INCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQASLVETT 435
           I CKF AISP TTEQI+FSV RTTDKFG+YKLEIPSV+GI+CA + +++SSCQASL+ ++
Sbjct: 61  IECKFQAISPRTTEQISFSVTRTTDKFGVYKLEIPSVEGIECASDSAIESSCQASLMWSS 120

Query: 436 SSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 573
           SS CN+PG KTT+D++A KSKQANVC YSLNALNYRP +RDT LCG
Sbjct: 121 SSSCNVPGHKTTTDEIAIKSKQANVCIYSLNALNYRPSERDTALCG 166


>ref|XP_002512897.1| conserved hypothetical protein [Ricinus communis]
           gi|223547908|gb|EEF49400.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 165

 Score =  216 bits (549), Expect = 4e-54
 Identities = 99/165 (60%), Positives = 134/165 (81%)
 Frame = +1

Query: 79  MDPRVLFILVSLFTQSLSKESPSPRTTSNIAVMGFVYCDICSNNTFSRHSYFLPGVKVHI 258
           M+P +LFIL SLF +++S +    +T ++I VMGFVYCDICSNN+F+RHSYFLPG  V I
Sbjct: 1   MNPLILFILSSLFIKTISLKVEPAKTNAHITVMGFVYCDICSNNSFTRHSYFLPGAGVKI 60

Query: 259 NCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQASLVETTS 438
           +CKF A SP   EQ++FSVNRTT+++G+YKLEIPSVDGI CA E +++SSC+A+L+ ++S
Sbjct: 61  DCKFKASSPKVKEQVSFSVNRTTNRYGVYKLEIPSVDGIACA-EAAIESSCEATLMWSSS 119

Query: 439 SVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 573
             CN+PG K+TSDQ++ K+++AN+C YSLNA+NYRP K D  LCG
Sbjct: 120 KSCNVPGYKSTSDQISIKARRANLCIYSLNAMNYRPSKTDLALCG 164


>ref|XP_002299330.1| predicted protein [Populus trichocarpa] gi|222846588|gb|EEE84135.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  213 bits (542), Expect = 3e-53
 Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
 Frame = +1

Query: 91  VLFILVSLFTQSLSKES-PSPRTTSNIAVMGFVYCDICSNNTFSRHSYFLPGVKVHINCK 267
           +L  L +LF   LS  + P+   TS I+V+G VYCD CS NTFSRHSYFLPG  VHI C 
Sbjct: 6   ILVFLATLFALPLSLIARPATNPTSRISVVGVVYCDTCSTNTFSRHSYFLPGADVHIQCI 65

Query: 268 FNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQASLVETTSSVC 447
           FNA SP T E+I FSVNRTTD++GIYKLE+P VDG+ C E  +++S CQASL+ ++S VC
Sbjct: 66  FNANSPKTREKIEFSVNRTTDRYGIYKLEVPEVDGVDCEEGFAIESVCQASLIGSSSRVC 125

Query: 448 NIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCGEYKEGMSDSINSAK 615
           N+PGL+ ++++++ KSKQ N+C YSLNAL+YRP K++  LCG +KE + +S+NS+K
Sbjct: 126 NVPGLRISTNEISVKSKQNNLCIYSLNALSYRPSKKNITLCGSHKEELPNSLNSSK 181


>ref|NP_001235830.1| uncharacterized protein LOC100500029 precursor [Glycine max]
           gi|255628627|gb|ACU14658.1| unknown [Glycine max]
          Length = 173

 Score =  213 bits (541), Expect = 4e-53
 Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 7/172 (4%)
 Frame = +1

Query: 79  MDPRVLFILVSLFTQSLSKESPSPRTT-------SNIAVMGFVYCDICSNNTFSRHSYFL 237
           M+   L +L+ LFTQ L  E   P+         S I+VMGFVYCD CSNN+FSRHSYFL
Sbjct: 1   MNSITLLVLLPLFTQFLEVEPERPKLPGKTRFPISQISVMGFVYCDFCSNNSFSRHSYFL 60

Query: 238 PGVKVHINCKFNAISPTTTEQITFSVNRTTDKFGIYKLEIPSVDGIKCAEEQSVQSSCQA 417
           PG +V ++C F A+S  T+EQI+ SVNRTT+K+G+YKLEIPSVDG+KCAE+ +V SSCQA
Sbjct: 61  PGAEVKVDCMFKALSEKTSEQISLSVNRTTNKYGMYKLEIPSVDGVKCAEDSAVVSSCQA 120

Query: 418 SLVETTSSVCNIPGLKTTSDQMAFKSKQANVCYYSLNALNYRPPKRDTNLCG 573
           SL+ ++SS CN+PG KTTS+ +A K+++AN+C YS NAL +RP KRD  LCG
Sbjct: 121 SLIGSSSSACNVPGYKTTSNVIAIKARRANLCIYSFNALTFRPSKRDITLCG 172


Top