BLASTX nr result

ID: Coptis25_contig00030516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030516
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]   154   7e-36
ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258...   153   2e-35
ref|XP_002310923.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
gb|ABK95143.1| unknown [Populus trichocarpa]                          149   3e-34
ref|XP_003531780.1| PREDICTED: uncharacterized protein LOC100777...   147   7e-34

>emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]
          Length = 410

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/83 (85%), Positives = 80/83 (96%)
 Frame = -3

Query: 276 DVDPIQVELLLGKAYSDWGHVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAER 97
           +VDP+QVELLLGKAYSDWGH+SDAVSVYDQLIS HP DFRGYLAKGIILK+NG +G+AER
Sbjct: 328 EVDPVQVELLLGKAYSDWGHISDAVSVYDQLISSHPEDFRGYLAKGIILKENGNIGDAER 387

Query: 96  MFIQARFFAPDKAKSFVDRYSKQ 28
           MFIQARFFAP+KAKSFVDRYS++
Sbjct: 388 MFIQARFFAPEKAKSFVDRYSRK 410


>ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258138 [Vitis vinifera]
           gi|297735765|emb|CBI18452.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = -3

Query: 276 DVDPIQVELLLGKAYSDWGHVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAER 97
           +VDP+QVELLLGKAYSDWGH+SDAVS+YDQLIS HP DFRGYLAKGIILK+NG +G+AER
Sbjct: 336 EVDPVQVELLLGKAYSDWGHISDAVSLYDQLISSHPEDFRGYLAKGIILKENGNIGDAER 395

Query: 96  MFIQARFFAPDKAKSFVDRYSKQ 28
           MFIQARFFAP+KAKSFVDRYS++
Sbjct: 396 MFIQARFFAPEKAKSFVDRYSRK 418


>ref|XP_002310923.1| predicted protein [Populus trichocarpa] gi|222850743|gb|EEE88290.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = -3

Query: 276 DVDPIQVELLLGKAYSDWGHVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAER 97
           +VDPIQV+LLLGKAYSDWGHVSDAVSVYDQLIS HP+DFRGYLAKGIILK+NG VG+AER
Sbjct: 253 EVDPIQVDLLLGKAYSDWGHVSDAVSVYDQLISSHPDDFRGYLAKGIILKENGNVGDAER 312

Query: 96  MFIQARFFAPDKAKSFVDRYSKQ 28
           MFIQARFFAP+KAK  VDRY+++
Sbjct: 313 MFIQARFFAPEKAKVLVDRYARK 335


>gb|ABK95143.1| unknown [Populus trichocarpa]
          Length = 405

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/83 (84%), Positives = 79/83 (95%)
 Frame = -3

Query: 276 DVDPIQVELLLGKAYSDWGHVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAER 97
           +VDPIQV+LLLGKAYSDWGHVSDAVSVYDQLIS HP+DFRGYLAKGIILK+NG VG+AER
Sbjct: 323 EVDPIQVDLLLGKAYSDWGHVSDAVSVYDQLISSHPDDFRGYLAKGIILKENGNVGDAER 382

Query: 96  MFIQARFFAPDKAKSFVDRYSKQ 28
           MFIQARFFAP+KAK  VDRY+++
Sbjct: 383 MFIQARFFAPEKAKVLVDRYARK 405


>ref|XP_003531780.1| PREDICTED: uncharacterized protein LOC100777868 [Glycine max]
          Length = 393

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/81 (83%), Positives = 77/81 (95%)
 Frame = -3

Query: 273 VDPIQVELLLGKAYSDWGHVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAERM 94
           +DP+QVELLLGKAYSDWGHVSDAV+VYDQLIS HPNDFRGYLAKGIILK+N  +G+AERM
Sbjct: 313 LDPVQVELLLGKAYSDWGHVSDAVTVYDQLISTHPNDFRGYLAKGIILKENKNIGDAERM 372

Query: 93  FIQARFFAPDKAKSFVDRYSK 31
           FIQARFFAPD+AK+ VDRYS+
Sbjct: 373 FIQARFFAPDRAKALVDRYSR 393


Top