BLASTX nr result

ID: Coptis25_contig00030509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030509
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...   358   6e-97
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]   358   6e-97
gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]           351   9e-95
ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...   351   1e-94
gb|ACU56981.1| importin alpha [Citrus sinensis]                       346   4e-93

>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
           gi|296089795|emb|CBI39614.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score =  358 bits (920), Expect = 6e-97
 Identities = 177/234 (75%), Positives = 197/234 (84%)
 Frame = +3

Query: 3   C*KVNAAMDHQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKK 182
           C ++   + H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKK
Sbjct: 290 CPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKK 349

Query: 183 EACWTISNITAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQI 362
           EACWTISNITAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQI
Sbjct: 350 EACWTISNITAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQI 409

Query: 363 QYLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDC 542
           Q+L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C
Sbjct: 410 QFLVSQGCIKPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDEC 469

Query: 543 GGLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 704
            GLDKIE LQ+HDNNEIYEK+VK             QN QDG DG  QGF F S
Sbjct: 470 DGLDKIELLQTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 522


>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
          Length = 523

 Score =  358 bits (920), Expect = 6e-97
 Identities = 177/234 (75%), Positives = 197/234 (84%)
 Frame = +3

Query: 3   C*KVNAAMDHQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKK 182
           C ++   + H S TVL+PALRT+GNIVTGDDAQTQFVIDNQVLPCLYQLLTQ +KKSIKK
Sbjct: 278 CPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKK 337

Query: 183 EACWTISNITAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQI 362
           EACWTISNITAGNKGQIQA I+ANIILPLV LLQHAEFDIKKEAAW +SNATSGGS EQI
Sbjct: 338 EACWTISNITAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQI 397

Query: 363 QYLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDC 542
           Q+L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G++GG+N +AQM+D+C
Sbjct: 398 QFLVSQGCIKPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDEC 457

Query: 543 GGLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNFES 704
            GLDKIE LQ+HDNNEIYEK+VK             QN QDG DG  QGF F S
Sbjct: 458 DGLDKIELLQTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDG-DGNQQGFGFGS 510


>gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum annuum]
          Length = 535

 Score =  351 bits (901), Expect = 9e-95
 Identities = 173/232 (74%), Positives = 195/232 (84%)
 Frame = +3

Query: 3   C*KVNAAMDHQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKK 182
           C ++   + H S TVL+PALRT GNIVTGDDAQTQ+VIDN+VLPCLYQLLTQ +KKSIKK
Sbjct: 290 CPRLVELLLHPSPTVLIPALRTAGNIVTGDDAQTQYVIDNRVLPCLYQLLTQNHKKSIKK 349

Query: 183 EACWTISNITAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQI 362
           EACWTISNITAGN+ QIQA I+ANIILPLV LLQ+AEFDIKKEAAWA+SNATSGGS EQI
Sbjct: 350 EACWTISNITAGNRAQIQAVIEANIILPLVHLLQNAEFDIKKEAAWAISNATSGGSNEQI 409

Query: 363 QYLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDC 542
           ++LA+QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKE G +GG+N +AQM+D+C
Sbjct: 410 RFLASQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEMDKETGANGGINLYAQMIDEC 469

Query: 543 GGLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 698
            GLDKIENLQ+HDNNEIYEK VK             QN  DGVDG  QGF F
Sbjct: 470 EGLDKIENLQTHDNNEIYEKTVK-ILEKYWAEEDEEQNLPDGVDGNQQGFQF 520


>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  351 bits (900), Expect = 1e-94
 Identities = 174/232 (75%), Positives = 192/232 (82%)
 Frame = +3

Query: 3   C*KVNAAMDHQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKK 182
           C ++   + H S TVL+PALRT+GNIVTGDD QTQFVIDNQVLPCL+QLL Q +KKSIKK
Sbjct: 291 CRRLVELLLHPSPTVLIPALRTVGNIVTGDDGQTQFVIDNQVLPCLHQLLLQNHKKSIKK 350

Query: 183 EACWTISNITAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQI 362
           EACWTISNITAGN+ QIQA I+ANIILPLV LLQHAEFDIKKEAAWA+SNATS GS EQI
Sbjct: 351 EACWTISNITAGNRTQIQAVIEANIILPLVNLLQHAEFDIKKEAAWAISNATSAGSHEQI 410

Query: 363 QYLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDC 542
           Q+L +QGCIKP+CDLL+CPDPRIVTVCLEGLENILKVGE DKEMG +GGVN +AQMVD+C
Sbjct: 411 QFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNGGVNLYAQMVDEC 470

Query: 543 GGLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQDGVDGTPQGFNF 698
            GLDKIENLQ+HDNNEIYEKAVK                QDG DG  QGF F
Sbjct: 471 DGLDKIENLQTHDNNEIYEKAVKILERYWAEEEDGEPIVQDGGDGNQQGFAF 522


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score =  346 bits (887), Expect = 4e-93
 Identities = 170/236 (72%), Positives = 195/236 (82%), Gaps = 1/236 (0%)
 Frame = +3

Query: 3   C*KVNAAMDHQSSTVLVPALRTIGNIVTGDDAQTQFVIDNQVLPCLYQLLTQLYKKSIKK 182
           C ++   + H S+TVL+PALRT+GNIVTGDDAQTQFVIDN VLPCLYQLLT  +KKSIKK
Sbjct: 288 CPRLVELLMHPSATVLIPALRTVGNIVTGDDAQTQFVIDNGVLPCLYQLLTHNHKKSIKK 347

Query: 183 EACWTISNITAGNKGQIQAAIDANIILPLVQLLQHAEFDIKKEAAWALSNATSGGSREQI 362
           EACWTISNITAGN+ QIQA I+ANIILPLV LLQHAEF+IKKEAAWA+SNATSGGS +QI
Sbjct: 348 EACWTISNITAGNRAQIQAVIEANIILPLVHLLQHAEFEIKKEAAWAISNATSGGSHQQI 407

Query: 363 QYLANQGCIKPVCDLLVCPDPRIVTVCLEGLENILKVGETDKEMGESGGVNKFAQMVDDC 542
           Q+L +QGCIKP+CDLLVCPDPRIVTVCLEGLENILKVGE DKEMG + G+N +AQM+D+C
Sbjct: 408 QFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEADKEMGMNNGINVYAQMIDEC 467

Query: 543 GGLDKIENLQSHDNNEIYEKAVKXXXXXXXXXXXXXQNFQD-GVDGTPQGFNFESD 707
            GLDKIENLQ+HDNNEIYEKAVK             Q  Q+ G+    QGF F ++
Sbjct: 468 DGLDKIENLQTHDNNEIYEKAVKILERYWAEEEEEEQLIQEGGIGNQQQGFGFATN 523


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