BLASTX nr result
ID: Coptis25_contig00030508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030508 (554 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera] 211 8e-53 ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containi... 201 8e-50 ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-45 ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containi... 161 6e-38 ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containi... 158 5e-37 >emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera] Length = 1009 Score = 211 bits (536), Expect = 8e-53 Identities = 107/181 (59%), Positives = 134/181 (74%) Frame = -3 Query: 549 EEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGI 370 +EA+ +F MQL+GVKPD+ISW+AL+SGFARNG+ID +L LEE+ GL+P V+SWNGI Sbjct: 266 DEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGI 325 Query: 369 ISGCVQNEYFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDL 190 ISGCVQN Y EDA +F++MLW PN +T A ILPAC L L LGK +H A K + Sbjct: 326 ISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGI 385 Query: 189 LGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEASVQLYS 10 +GN++V GS+IDMYSKCG D AE+VF K E KNTA+ NE+I AYVNEG + +A L S Sbjct: 386 VGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRS 445 Query: 9 M 7 M Sbjct: 446 M 446 Score = 118 bits (295), Expect = 7e-25 Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 12/195 (6%) Frame = -3 Query: 552 LEEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNG 373 +E+A + SMQ +G KPDVI++N ++SG ARNG ++ LL E+ +GLKP V S+N Sbjct: 436 VEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNV 495 Query: 372 IISGCVQNEYFEDAFIVF------------NQMLWSFGKPNAVTFACILPACGALSDLLL 229 +ISG Q+ +A VF N++L +PN +T LPAC L+ Sbjct: 496 LISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQ 555 Query: 228 GKGMHACALKCDLLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVN 49 GK +H L+ NIFV +L+DMY+KC D A +VF +++ +NT N ++ Y+N Sbjct: 556 GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIN 615 Query: 48 EGNMMEASVQLYSML 4 EA ML Sbjct: 616 NKQPEEALKLFLEML 630 Score = 85.1 bits (209), Expect = 7e-15 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Frame = -3 Query: 513 NGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNEYFED 334 NG +P++ +ALV +A+ +D + ++ I G SWN +++G + N+ E+ Sbjct: 566 NGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG----RNTVSWNALMAGYINNKQPEE 621 Query: 333 AFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDL--LGNIFVGGSL 160 A +F +ML +P+++TF + PACG ++ + G+G+H A KC L L N + +L Sbjct: 622 ALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IXSAL 680 Query: 159 IDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEG 43 IDMY+KCG A+ VF K+ + N +I A+ G Sbjct: 681 IDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHG 719 Score = 65.5 bits (158), Expect = 6e-09 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 1/166 (0%) Frame = -3 Query: 522 MQLNGVKPDVISWNALVSGFARNG-KIDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNE 346 ++LN +K N LV + +N ++++ +LL+EI V ++ +I ++E Sbjct: 107 VKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPN----RTVPAYAALIRSYCRSE 162 Query: 345 YFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDLLGNIFVGG 166 +++ F F M++ P+ IL AC A+ +GK +H ++ + ++FVG Sbjct: 163 QWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGN 222 Query: 165 SLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEA 28 +LI YS CG + VF M+ ++ +I AY+ EG EA Sbjct: 223 ALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEA 268 >ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis sativus] Length = 677 Score = 201 bits (510), Expect = 8e-50 Identities = 104/182 (57%), Positives = 128/182 (70%) Frame = -3 Query: 552 LEEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNG 373 L EA +VF SMQ +G+KPD+ISWNALVSGFAR G+ + +L LE ++ GL+P V+SWNG Sbjct: 250 LNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNG 309 Query: 372 IISGCVQNEYFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCD 193 +ISGCVQN YF+DA VF ML PN+VT A ILPAC L DL LG+ +HA ALKC+ Sbjct: 310 VISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCE 369 Query: 192 LLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEASVQLY 13 L NI+V GSL+DMYSKCG+ D AE +F K E KN + NEII Y+N+G A Sbjct: 370 LCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFR 429 Query: 12 SM 7 SM Sbjct: 430 SM 431 Score = 97.1 bits (240), Expect = 2e-18 Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 10/170 (5%) Frame = -3 Query: 543 ARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGIIS 364 A + F SMQ +G+KPDV+++N L++G+A+NG+ E+ LL ++ L P V S N ++S Sbjct: 424 ALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNVLVS 483 Query: 363 GCVQNEYFEDAFIVFNQMLWSFGK----------PNAVTFACILPACGALSDLLLGKGMH 214 G Q+ +A + ML + PN VT L AC +L+ L GK +H Sbjct: 484 GFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIH 543 Query: 213 ACALKCDLLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEII 64 L+ + N F+ +LI+MY+KCG D A +VF +++ +N N +I Sbjct: 544 GYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALI 593 Score = 57.0 bits (136), Expect = 2e-06 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%) Frame = -3 Query: 522 MQLNGVKPDVISWNALVSGFARNGK-IDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNE 346 ++LN + D + L + ++ K +D ++ +EI + + ++ +I ++E Sbjct: 92 VKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIP----ERTLPAYAALIRAYCRSE 147 Query: 345 YFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDLLGNIFVGG 166 + + F F M+ P+ IL AC + GK H A++ ++ +I + Sbjct: 148 KWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIEN 207 Query: 165 SLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEASVQLYSM 7 +L+D Y CG + VF M K+ ++ AY+ EG + EA +SM Sbjct: 208 ALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSM 260 >ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like, partial [Cucumis sativus] Length = 406 Score = 186 bits (472), Expect = 2e-45 Identities = 94/155 (60%), Positives = 115/155 (74%) Frame = -3 Query: 552 LEEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNG 373 L EA +VF SMQ +G+KPD+ISWNALVSGFAR G+ + +L LE ++ GL+P V+SWNG Sbjct: 250 LNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNG 309 Query: 372 IISGCVQNEYFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCD 193 +ISGCVQN YF+DA VF ML PN+VT A ILPAC L DL LG+ +HA ALKC+ Sbjct: 310 VISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCE 369 Query: 192 LLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKN 88 L NI+V GSL+DMYSKCG+ D AE +F K E KN Sbjct: 370 LCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKN 404 Score = 57.0 bits (136), Expect = 2e-06 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 1/173 (0%) Frame = -3 Query: 522 MQLNGVKPDVISWNALVSGFARNGK-IDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNE 346 ++LN + D + L + ++ K +D ++ +EI + + ++ +I ++E Sbjct: 92 VKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIP----ERTLPAYAALIRAYCRSE 147 Query: 345 YFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDLLGNIFVGG 166 + + F F M+ P+ IL AC + GK H A++ ++ +I + Sbjct: 148 KWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIEN 207 Query: 165 SLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEASVQLYSM 7 +L+D Y CG + VF M K+ ++ AY+ EG + EA +SM Sbjct: 208 ALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSM 260 >ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like [Brachypodium distachyon] Length = 735 Score = 161 bits (408), Expect = 6e-38 Identities = 81/165 (49%), Positives = 113/165 (68%) Frame = -3 Query: 522 MQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNEY 343 MQ +GV+PDVISWN LVSGFARNG + +L L +E+R G+KP VSSWN IISGCVQN Sbjct: 1 MQASGVRPDVISWNTLVSGFARNGDLGAALHLFDEMRLRGVKPRVSSWNCIISGCVQNSR 60 Query: 342 FEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDLLGNIFVGGS 163 +++A +F +M P+AVT A ILPAC L L +GK +H+ ++C + N+++G S Sbjct: 61 YDEALGIFQEMC-ETEMPDAVTVASILPACTGLMALGIGKQLHSYVVRCGIKLNVYIGSS 119 Query: 162 LIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEGNMMEA 28 LI MYS+C + A VF ++ +N V NE+I +Y+N+G M +A Sbjct: 120 LIGMYSECRQFAYARSVFSAIDERNVTVWNELIQSYINDGRMDKA 164 Score = 96.3 bits (238), Expect = 3e-18 Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 14/197 (7%) Frame = -3 Query: 552 LEEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNG 373 +++A + F+ MQ +G++PD++++N+ +SG+AR G+ + + LL + LKP V S N Sbjct: 161 MDKAWEAFNLMQEDGLEPDIVTYNSFISGYARTGQKELAYELLSGMANFSLKPTVISMNA 220 Query: 372 IISGCVQNEYFEDAFIVFNQML--------WSFG------KPNAVTFACILPACGALSDL 235 +ISG DA F M WSF +PN T +L L Sbjct: 221 LISGLHHYGLCADALEAFRYMQLPNREAKHWSFHDNNSPIQPNGTTITSVLSLLTDLKLH 280 Query: 234 LLGKGMHACALKCDLLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAY 55 GK +H AL+ L NIFV L+D+Y K G A F + KN N ++ AY Sbjct: 281 RFGKEVHCYALRNGLTSNIFVSSKLVDLYGKTGDMVSAANFFQGIRNKNVVTWNSLLAAY 340 Query: 54 VNEGNMMEASVQLYSML 4 + A Y ML Sbjct: 341 KHNRKPEVALKLFYEML 357 Score = 57.0 bits (136), Expect = 2e-06 Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Frame = -3 Query: 513 NGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNEYFED 334 NG+ ++ + LV + + G + + + IR V +WN +++ N E Sbjct: 293 NGLTSNIFVSSKLVDLYGKTGDMVSAANFFQGIRN----KNVVTWNSLLAAYKHNRKPEV 348 Query: 333 AFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDLLGNIFVG----- 169 A +F +ML S PN VT +L + G L G+ +H K N F G Sbjct: 349 ALKLFYEMLKSDLLPNLVTMHIVLLSSGMTMALRYGRELHGYINK-----NWFGGYPDTL 403 Query: 168 -GSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYV 52 +LIDMY KCG+ D A VF K+ AV N ++ Y+ Sbjct: 404 ATALIDMYGKCGKIDDARLVFECTVEKDIAVWNAMMSCYL 443 >ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like [Vitis vinifera] Length = 700 Score = 158 bits (400), Expect = 5e-37 Identities = 80/133 (60%), Positives = 98/133 (73%) Frame = -3 Query: 405 GLKPGVSSWNGIISGCVQNEYFEDAFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLG 226 GL+P V+SWNGIISGCVQN Y EDA +F++MLW PN +T A ILPAC L L LG Sbjct: 5 GLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLG 64 Query: 225 KGMHACALKCDLLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNE 46 K +HA ALK ++GN++V GS+IDMYSKCG D AE+VF+K E KNTA+ NE+I AYVNE Sbjct: 65 KAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNE 124 Query: 45 GNMMEASVQLYSM 7 G + +A L SM Sbjct: 125 GKVEDALGLLRSM 137 Score = 115 bits (288), Expect = 5e-24 Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 12/195 (6%) Frame = -3 Query: 552 LEEARDVFDSMQLNGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNG 373 +E+A + SMQ +G KPDVI++N ++SG ARNG ++ LL E+ +GLKP V S+N Sbjct: 127 VEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNV 186 Query: 372 IISGCVQNEYFEDAFIVF------------NQMLWSFGKPNAVTFACILPACGALSDLLL 229 +ISG Q+ +A VF N++L +PN +T LPAC L+ Sbjct: 187 LISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQ 246 Query: 228 GKGMHACALKCDLLGNIFVGGSLIDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVN 49 GK +H L+ NIFV +L+DMY+KC D A +VF +++ +NT N ++ Y+ Sbjct: 247 GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIY 306 Query: 48 EGNMMEASVQLYSML 4 EA ML Sbjct: 307 NKQPEEALKLFLEML 321 Score = 85.1 bits (209), Expect = 7e-15 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Frame = -3 Query: 513 NGVKPDVISWNALVSGFARNGKIDESLRLLEEIRGIGLKPGVSSWNGIISGCVQNEYFED 334 NG +P++ +ALV +A+ +D + ++ I G SWN +++G + N+ E+ Sbjct: 257 NGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG----RNTVSWNALMAGYIYNKQPEE 312 Query: 333 AFIVFNQMLWSFGKPNAVTFACILPACGALSDLLLGKGMHACALKCDL--LGNIFVGGSL 160 A +F +ML +P+++TF + PACG ++ + G+G+H A KC L L N + +L Sbjct: 313 ALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA-IASAL 371 Query: 159 IDMYSKCGRRDLAERVFMKMEIKNTAVINEIIMAYVNEG 43 IDMY+KCG A+ VF K+ + N +I A+ G Sbjct: 372 IDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHG 410