BLASTX nr result

ID: Coptis25_contig00030507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030507
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34226.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>gb|AFK34226.1| unknown [Lotus japonicus]
          Length = 253

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 179 AEADYLYSLITKAKFENNRYQKPRREPMVTIYNVDMF 69
           AEAD LYSLITKAKFENNRYQKP+++P  +  +VD F
Sbjct: 217 AEADLLYSLITKAKFENNRYQKPKKQPKTSTQHVDWF 253


>ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 753

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 179 AEADYLYSLITKAKFENNRYQKPRREPMVTIYNVDMF 69
           AEAD LYSLITKAKFENNRYQKP+++P  +  +VD F
Sbjct: 717 AEADLLYSLITKAKFENNRYQKPKKQPKSSSQHVDWF 753


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