BLASTX nr result

ID: Coptis25_contig00030502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030502
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276329.1| PREDICTED: protein PROLIFERA [Vitis vinifera...   394   e-108
emb|CAN61585.1| hypothetical protein VITISV_007265 [Vitis vinifera]   394   e-108
ref|XP_004136153.1| PREDICTED: protein PROLIFERA-like [Cucumis s...   384   e-105
ref|XP_004163153.1| PREDICTED: LOW QUALITY PROTEIN: protein PROL...   382   e-104
ref|XP_003625966.1| Mini-chromosome maintenance [Medicago trunca...   379   e-103

>ref|XP_002276329.1| PREDICTED: protein PROLIFERA [Vitis vinifera]
           gi|297743977|emb|CBI36947.3| unnamed protein product
           [Vitis vinifera]
          Length = 718

 Score =  394 bits (1012), Expect = e-108
 Identities = 197/225 (87%), Positives = 205/225 (91%)
 Frame = -2

Query: 676 DPKQRMPPEIKRFYEVYIKASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVS 497
           DP+Q+MPPEIKRFYEVYI+ASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQV+
Sbjct: 115 DPRQKMPPEIKRFYEVYIRASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVA 174

Query: 496 VYTCEDCGFEIYQEVTARIFMPLFECPSKRCQINNAKGNLILQLRASKFLKFQEAKIQEL 317
           VYTCEDCGFEIYQEVTAR+FMPLFECPS RCQ N  KGN+ILQLRASKFLKFQEAKIQEL
Sbjct: 175 VYTCEDCGFEIYQEVTARVFMPLFECPSTRCQTNRTKGNIILQLRASKFLKFQEAKIQEL 234

Query: 316 AEHVPKGHIPRSMTVHLRGELTRKVAPGDVVELSGIFLPIPYMGFRAMRAGLVADTYLEA 137
           AEHVPKGHIPR+MTVHLRGELTRKVAPGDVVELSGIFLPIPY GFRAMRAGLVADTYLEA
Sbjct: 235 AEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEA 294

Query: 136 MSVNHFXXXXXXXXXXXXXXEQIARLAEDGDIYNKLSRSLAPEIF 2
           MSV HF              EQIARLAEDGDIYNKL+RSLAPEIF
Sbjct: 295 MSVTHFKKKYEEYELRRDEEEQIARLAEDGDIYNKLARSLAPEIF 339


>emb|CAN61585.1| hypothetical protein VITISV_007265 [Vitis vinifera]
          Length = 703

 Score =  394 bits (1012), Expect = e-108
 Identities = 197/225 (87%), Positives = 205/225 (91%)
 Frame = -2

Query: 676 DPKQRMPPEIKRFYEVYIKASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVS 497
           DP+Q+MPPEIKRFYEVYI+ASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQV+
Sbjct: 100 DPRQKMPPEIKRFYEVYIRASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVA 159

Query: 496 VYTCEDCGFEIYQEVTARIFMPLFECPSKRCQINNAKGNLILQLRASKFLKFQEAKIQEL 317
           VYTCEDCGFEIYQEVTAR+FMPLFECPS RCQ N  KGN+ILQLRASKFLKFQEAKIQEL
Sbjct: 160 VYTCEDCGFEIYQEVTARVFMPLFECPSTRCQTNRTKGNIILQLRASKFLKFQEAKIQEL 219

Query: 316 AEHVPKGHIPRSMTVHLRGELTRKVAPGDVVELSGIFLPIPYMGFRAMRAGLVADTYLEA 137
           AEHVPKGHIPR+MTVHLRGELTRKVAPGDVVELSGIFLPIPY GFRAMRAGLVADTYLEA
Sbjct: 220 AEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEA 279

Query: 136 MSVNHFXXXXXXXXXXXXXXEQIARLAEDGDIYNKLSRSLAPEIF 2
           MSV HF              EQIARLAEDGDIYNKL+RSLAPEIF
Sbjct: 280 MSVTHFKKKYEEYELRRDEEEQIARLAEDGDIYNKLARSLAPEIF 324


>ref|XP_004136153.1| PREDICTED: protein PROLIFERA-like [Cucumis sativus]
          Length = 743

 Score =  384 bits (987), Expect = e-105
 Identities = 191/225 (84%), Positives = 204/225 (90%)
 Frame = -2

Query: 676 DPKQRMPPEIKRFYEVYIKASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVS 497
           DP+QRMPPEIKR++EVYI+ASSK RPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQV+
Sbjct: 140 DPRQRMPPEIKRYFEVYIRASSKGRPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVA 199

Query: 496 VYTCEDCGFEIYQEVTARIFMPLFECPSKRCQINNAKGNLILQLRASKFLKFQEAKIQEL 317
           VYTCEDCGFEIYQEVTAR+FMPLFECPS+RC+ N  KGNLILQLRASKFLKFQEAK+QEL
Sbjct: 200 VYTCEDCGFEIYQEVTARVFMPLFECPSQRCRTNQTKGNLILQLRASKFLKFQEAKLQEL 259

Query: 316 AEHVPKGHIPRSMTVHLRGELTRKVAPGDVVELSGIFLPIPYMGFRAMRAGLVADTYLEA 137
           AEHVPKGHIPR+MTVHLRGELTRKVAPGDVVELSGIFLPIPY GFRAMRAGLVADT+LEA
Sbjct: 260 AEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTFLEA 319

Query: 136 MSVNHFXXXXXXXXXXXXXXEQIARLAEDGDIYNKLSRSLAPEIF 2
           MS+ HF              E IARLAEDGDIYNKL+RSLAPEIF
Sbjct: 320 MSITHFKKKYEDYELRGDEEELIARLAEDGDIYNKLARSLAPEIF 364


>ref|XP_004163153.1| PREDICTED: LOW QUALITY PROTEIN: protein PROLIFERA-like [Cucumis
           sativus]
          Length = 743

 Score =  382 bits (982), Expect = e-104
 Identities = 190/225 (84%), Positives = 203/225 (90%)
 Frame = -2

Query: 676 DPKQRMPPEIKRFYEVYIKASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVS 497
           DP+QRMPPEIKR++EVYI+ASSK RPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQV+
Sbjct: 140 DPRQRMPPEIKRYFEVYIRASSKGRPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVA 199

Query: 496 VYTCEDCGFEIYQEVTARIFMPLFECPSKRCQINNAKGNLILQLRASKFLKFQEAKIQEL 317
           VYTCEDCGFEIYQEVTAR+FMPLFECPS+RC+ N  KGNLILQLRASKFLKFQEAK+QEL
Sbjct: 200 VYTCEDCGFEIYQEVTARVFMPLFECPSQRCRTNQTKGNLILQLRASKFLKFQEAKLQEL 259

Query: 316 AEHVPKGHIPRSMTVHLRGELTRKVAPGDVVELSGIFLPIPYMGFRAMRAGLVADTYLEA 137
           AEHVPKGHIPR+MTVHLRGELTRKVAPGDVVELSGIFLPIPY GFRAMRAGLVADT+LEA
Sbjct: 260 AEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTFLEA 319

Query: 136 MSVNHFXXXXXXXXXXXXXXEQIARLAEDGDIYNKLSRSLAPEIF 2
           MS+ HF              E IARLAEDGDIYNKL+RSLAPE F
Sbjct: 320 MSITHFKKKYEEYELRGDEEELIARLAEDGDIYNKLARSLAPEXF 364


>ref|XP_003625966.1| Mini-chromosome maintenance [Medicago truncatula]
           gi|355500981|gb|AES82184.1| Mini-chromosome maintenance
           [Medicago truncatula]
          Length = 720

 Score =  379 bits (973), Expect = e-103
 Identities = 189/225 (84%), Positives = 204/225 (90%)
 Frame = -2

Query: 676 DPKQRMPPEIKRFYEVYIKASSKERPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVS 497
           DP Q+MPPEI+RF+EVYIKASSK RPFTIREVKAS IGQLVRI+GIVTRCSDVKPLMQV+
Sbjct: 117 DPHQKMPPEIRRFFEVYIKASSKGRPFTIREVKASNIGQLVRIAGIVTRCSDVKPLMQVA 176

Query: 496 VYTCEDCGFEIYQEVTARIFMPLFECPSKRCQINNAKGNLILQLRASKFLKFQEAKIQEL 317
           VYTCEDCGFEIYQEVTAR+FMPLFECPSKRC +N +KGN+ILQLRASKFL+FQEAKIQEL
Sbjct: 177 VYTCEDCGFEIYQEVTARVFMPLFECPSKRCVMNKSKGNVILQLRASKFLRFQEAKIQEL 236

Query: 316 AEHVPKGHIPRSMTVHLRGELTRKVAPGDVVELSGIFLPIPYMGFRAMRAGLVADTYLEA 137
           AEHVPKGHIPR+MTVHLRGELTRKV+PGDVVELSGIFLPIPY+GFRAMRAGLVADTYLEA
Sbjct: 237 AEHVPKGHIPRTMTVHLRGELTRKVSPGDVVELSGIFLPIPYVGFRAMRAGLVADTYLEA 296

Query: 136 MSVNHFXXXXXXXXXXXXXXEQIARLAEDGDIYNKLSRSLAPEIF 2
           MSV HF              EQI RLAEDGDIY+KL+RSLAPEIF
Sbjct: 297 MSVTHFKKKYEEYELIGDEEEQIKRLAEDGDIYDKLARSLAPEIF 341


Top