BLASTX nr result

ID: Coptis25_contig00030484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030484
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266693.2| PREDICTED: phospholipase D delta-like [Vitis...    62   2e-20
emb|CBI29771.3| unnamed protein product [Vitis vinifera]               62   2e-20
ref|XP_002304050.1| predicted protein [Populus trichocarpa] gi|2...    54   4e-15
emb|CAN68683.1| hypothetical protein VITISV_024815 [Vitis vinifera]    61   4e-15
ref|XP_002530670.1| phospholipase d beta, putative [Ricinus comm...    58   5e-15

>ref|XP_002266693.2| PREDICTED: phospholipase D delta-like [Vitis vinifera]
          Length = 856

 Score = 62.0 bits (149), Expect(2) = 2e-20
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 CFTMFGTCPSPFKRKPRHKGGHN-IITSDPYVSVCLAGATV 294
           CF MFG+C SPFK + +H   H+ IITSDPYVSVCLAGAT+
Sbjct: 52  CFNMFGSCTSPFKIRHKHSSKHHSIITSDPYVSVCLAGATI 92



 Score = 61.6 bits (148), Expect(2) = 2e-20
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +3

Query: 18  LASSSDYMEQTVLKQTEVAEKLVFLHSDLDLWILEAKSLPNMDLVSERMRR 170
           +A  S    +T++   EV+ + VFLH +LDLWILEAKSLPNMDL +ER+RR
Sbjct: 1   MAGDSTVHGETLVNVVEVSGEAVFLHGELDLWILEAKSLPNMDLATERVRR 51


>emb|CBI29771.3| unnamed protein product [Vitis vinifera]
          Length = 842

 Score = 62.0 bits (149), Expect(2) = 2e-20
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 CFTMFGTCPSPFKRKPRHKGGHN-IITSDPYVSVCLAGATV 294
           CF MFG+C SPFK + +H   H+ IITSDPYVSVCLAGAT+
Sbjct: 52  CFNMFGSCTSPFKIRHKHSSKHHSIITSDPYVSVCLAGATI 92



 Score = 61.6 bits (148), Expect(2) = 2e-20
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = +3

Query: 18  LASSSDYMEQTVLKQTEVAEKLVFLHSDLDLWILEAKSLPNMDLVSERMRR 170
           +A  S    +T++   EV+ + VFLH +LDLWILEAKSLPNMDL +ER+RR
Sbjct: 1   MAGDSTVHGETLVNVVEVSGEAVFLHGELDLWILEAKSLPNMDLATERVRR 51


>ref|XP_002304050.1| predicted protein [Populus trichocarpa] gi|222841482|gb|EEE79029.1|
           predicted protein [Populus trichocarpa]
          Length = 853

 Score = 53.5 bits (127), Expect(2) = 4e-15
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +3

Query: 72  AEKLVFLHSDLDLWILEAKSLPNMDLVSERMRR 170
           +++ VFLH +LD+WILEAKSLPNMDL SE MR+
Sbjct: 19  SKESVFLHGELDIWILEAKSLPNMDLASENMRK 51



 Score = 52.4 bits (124), Expect(2) = 4e-15
 Identities = 27/41 (65%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 CFTMFGTCPSPFKRKPR-HKGGHNIITSDPYVSVCLAGATV 294
           CFTM G+       KP  H G H+IITSDPYVSVCLAGATV
Sbjct: 52  CFTMCGSYSPLCGHKPMTHSGKHSIITSDPYVSVCLAGATV 92


>emb|CAN68683.1| hypothetical protein VITISV_024815 [Vitis vinifera]
          Length = 428

 Score = 61.2 bits (147), Expect(2) = 4e-15
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 CFTMFGTCPSPFKRKPRHKGGHN-IITSDPYVSVCLAGATV 294
           CF MFG+C SPFK + +H   H+ IITSDPYVSVCLAGAT+
Sbjct: 146 CFHMFGSCTSPFKIRHKHSSKHHSIITSDPYVSVCLAGATI 186



 Score = 44.7 bits (104), Expect(2) = 4e-15
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +3

Query: 99  DLDLWILEAKSLPNMDLVSERMRR 170
           +LDLWILEAK+LPNMDL +ER+RR
Sbjct: 122 ELDLWILEAKALPNMDLATERVRR 145


>ref|XP_002530670.1| phospholipase d beta, putative [Ricinus communis]
           gi|223529763|gb|EEF31701.1| phospholipase d beta,
           putative [Ricinus communis]
          Length = 856

 Score = 58.2 bits (139), Expect(2) = 5e-15
 Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 175 CFTMFGTCPSPF-KRKPRHKGGHNIITSDPYVSVCLAGATV 294
           CFT+FG+C +P  KR  +H G + +ITSDPYVSVCLAGATV
Sbjct: 52  CFTVFGSCTNPCGKRHIKHSGRNKMITSDPYVSVCLAGATV 92



 Score = 47.4 bits (111), Expect(2) = 5e-15
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +3

Query: 90  LHSDLDLWILEAKSLPNMDLVSERMRR 170
           LH +LD+WI+EAKSLPNMDL +E MRR
Sbjct: 25  LHGELDVWIIEAKSLPNMDLPAEHMRR 51


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