BLASTX nr result

ID: Coptis25_contig00030471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030471
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34793.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256...    88   8e-16
ref|XP_002514464.1| conserved hypothetical protein [Ricinus comm...    78   6e-13
ref|XP_003526393.1| PREDICTED: uncharacterized protein LOC100785...    75   4e-12
ref|NP_177537.2| uncharacterized protein [Arabidopsis thaliana] ...    67   1e-09

>emb|CBI34793.3| unnamed protein product [Vitis vinifera]
          Length = 829

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = -2

Query: 227 ERLP---YRSMFSPLFKSWLCLSFFNSYSFRYMGHPNGKVARASHSVFVAFVASGKDSNM 57
           ERLP   +R + +P+              F YMGHPNGKVARASHS+FVAF++SGKD+N 
Sbjct: 589 ERLPDLTFRKIVAPIM-------------FLYMGHPNGKVARASHSMFVAFISSGKDANH 635

Query: 56  DDRVLLKEQLVYYYMQRA 3
           D+RVLLKEQLV+YY+QR+
Sbjct: 636 DERVLLKEQLVFYYIQRS 653


>ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256489 [Vitis vinifera]
          Length = 819

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = -2

Query: 227 ERLP---YRSMFSPLFKSWLCLSFFNSYSFRYMGHPNGKVARASHSVFVAFVASGKDSNM 57
           ERLP   +R + +P+              F YMGHPNGKVARASHS+FVAF++SGKD+N 
Sbjct: 589 ERLPDLTFRKIVAPIM-------------FLYMGHPNGKVARASHSMFVAFISSGKDANH 635

Query: 56  DDRVLLKEQLVYYYMQRA 3
           D+RVLLKEQLV+YY+QR+
Sbjct: 636 DERVLLKEQLVFYYIQRS 653


>ref|XP_002514464.1| conserved hypothetical protein [Ricinus communis]
           gi|223546460|gb|EEF47960.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 829

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = -2

Query: 149 FRYMGHPNGKVARASHSVFVAFVASGKDSNMDDRVLLKEQLVYYYMQRA 3
           F YMGHPNGKVARASHS+FVAF++ GK S+ ++R LLKEQL +YYMQR+
Sbjct: 607 FLYMGHPNGKVARASHSMFVAFISLGKGSDENERALLKEQLAFYYMQRS 655


>ref|XP_003526393.1| PREDICTED: uncharacterized protein LOC100785487 [Glycine max]
          Length = 801

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/49 (71%), Positives = 41/49 (83%)
 Frame = -2

Query: 149 FRYMGHPNGKVARASHSVFVAFVASGKDSNMDDRVLLKEQLVYYYMQRA 3
           F YM HPNGKVARASHSVF+AF+  GKDS  +D V LKEQLV++YMQR+
Sbjct: 587 FLYMEHPNGKVARASHSVFMAFMTMGKDSEKNDEVSLKEQLVFHYMQRS 635


>ref|NP_177537.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332197412|gb|AEE35533.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 803

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = -2

Query: 158 SYSFRYMGHPNGKVARASHSVFVAFVASGKDSNMDDRVLLKEQLVYYYMQRA 3
           S  F Y+GHPN KVA+ASH++  AF++S K+S  D+R   KEQLV+YYMQR+
Sbjct: 598 STMFLYIGHPNRKVAQASHTLLAAFLSSAKESEEDERTQFKEQLVFYYMQRS 649


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