BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030463
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37913.3| unnamed protein product [Vitis vinifera]               72   4e-11
gb|AFW58602.1| eukaryotic translation initiation factor 4B [Zea ...    70   1e-10
ref|NP_001151349.1| eukaryotic translation initiation factor 4B ...    70   1e-10
gb|AAC28254.1| eukaryotic translation initiation factor 4B [Trit...    69   3e-10
ref|XP_003531329.1| PREDICTED: uncharacterized protein LOC100803...    69   4e-10

>emb|CBI37913.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
 Frame = +3

Query: 90  FPSLTEAAAVTKPKKKKGQTMNLQQFNNMGSSNDFSMESNKWITPDKMLRLPTGPKERSA 269
           FP+L  AAA TK KKKKGQT++L +F+  G+         K +T + ++ LPTGP++RSA
Sbjct: 23  FPTLATAAA-TKSKKKKGQTLSLSEFSAFGAGKSAQPSQTKGLTHEDLMMLPTGPRQRSA 81

Query: 270 QEME-------FKSYXXXXXXXXXXXXXXXXYDHDDERRPPSRADEVDNW 398
           +E++       F+SY                 D   E   PSRADE+D+W
Sbjct: 82  EELDRGRLGGGFRSYGSNGSGSEERRQGGFGRDSSRE-LAPSRADEIDDW 130


>gb|AFW58602.1| eukaryotic translation initiation factor 4B [Zea mays]
          Length = 527

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
 Frame = +3

Query: 87  AFPSLTEAAAV----TKPKKKKGQTMNLQQFNNMGSS---NDFSMESNKWITPDKMLRLP 245
           +FPSL EAAA        KK KG T++L +F   G++      +    K +T D+ML LP
Sbjct: 45  SFPSLREAAAAGGGGKSKKKNKGTTLSLSEFTTYGAAAAQRRAAPVEPKGLTHDEMLLLP 104

Query: 246 TGPKERSAQEME----FKSYXXXXXXXXXXXXXXXXYDHDDERRP--------PSRADEV 389
           TGP+ERSA+E++    F+SY                +D +D R P        PSRADE 
Sbjct: 105 TGPRERSAEELDRSRGFRSYGGGSGFGGPGGERRGGFDDEDRRGPGRSSDLDMPSRADEA 164

Query: 390 DNW 398
           D+W
Sbjct: 165 DDW 167


>ref|NP_001151349.1| eukaryotic translation initiation factor 4B [Zea mays]
           gi|195646008|gb|ACG42472.1| eukaryotic translation
           initiation factor 4B [Zea mays]
          Length = 527

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
 Frame = +3

Query: 87  AFPSLTEAAAV----TKPKKKKGQTMNLQQFNNMGSS---NDFSMESNKWITPDKMLRLP 245
           +FPSL EAAA        KK KG T++L +F   G++      +    K +T D+ML LP
Sbjct: 45  SFPSLREAAAAGGGGKSKKKNKGTTLSLSEFTTYGAAAAQRRAAPVEPKGLTHDEMLLLP 104

Query: 246 TGPKERSAQEME----FKSYXXXXXXXXXXXXXXXXYDHDDERRP--------PSRADEV 389
           TGP+ERSA+E++    F+SY                +D +D R P        PSRADE 
Sbjct: 105 TGPRERSAEELDRSRGFRSYGGGSGFGGPGGERRSGFDDEDRRGPGRSSDLDMPSRADEA 164

Query: 390 DNW 398
           D+W
Sbjct: 165 DDW 167


>gb|AAC28254.1| eukaryotic translation initiation factor 4B [Triticum aestivum]
          Length = 527

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
 Frame = +3

Query: 87  AFPSLTEA--AAVTKPKKKKGQTMNLQQFNNMGSSND---FSMESNKWITPDKMLRLPTG 251
           +FPSL EA  A   K KKKKG T++L +F   G++      +    K +TP +M+ LPTG
Sbjct: 42  SFPSLKEAVVAGGGKQKKKKGTTLSLSEFTTYGAAGAPRRVAPAEPKGLTPQEMMMLPTG 101

Query: 252 PKERSAQEME----FKSYXXXXXXXXXXXXXXXXYDHDDERRPPSRADEVDNW 398
           P+ERS  E++    F+SY                   D +   PSRADE DNW
Sbjct: 102 PRERSEDELDRSRGFRSYGGDREPRGGGFDDDRRSSRDSDLDMPSRADESDNW 154


>ref|XP_003531329.1| PREDICTED: uncharacterized protein LOC100803366 [Glycine max]
          Length = 551

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 50/132 (37%), Positives = 61/132 (46%), Gaps = 28/132 (21%)
 Frame = +3

Query: 87  AFPSLTEAAAVTKPKKKKGQTMNLQQFNNMGSSNDFSMESNKWITPDKMLRLPTGPKERS 266
           +FPSL EA   +KPKKKKG T+ L +FN  G         ++ +T D+ML LPTGPKERS
Sbjct: 36  SFPSLKEAVN-SKPKKKKGTTITLSEFNRGGF--------DQGLTRDEMLTLPTGPKERS 86

Query: 267 AQEMEFKSYXXXXXXXXXXXXXXXXYD------------------HDDERR--------- 365
           A+EM+F                    D                   D+ERR         
Sbjct: 87  AEEMQFNRLGGGFSSYDRSGGRSRDRDGGNNEGSWGGGGRRSYGGFDEERRGPNPRVSEL 146

Query: 366 -PPSRADEVDNW 398
             PSRADEVDNW
Sbjct: 147 DQPSRADEVDNW 158