BLASTX nr result

ID: Coptis25_contig00030462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030462
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   137   7e-31
gb|ADE76890.1| unknown [Picea sitchensis]                             132   2e-29
gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| T...   132   3e-29
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   128   4e-28
gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japo...   127   9e-28

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -1

Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291
           LEKGE+IVAGSEDSNVYFYD TRP+HTCVNKLQGHGSPVIG+AWNHGEN LASSDS+GTV
Sbjct: 409 LEKGEYIVAGSEDSNVYFYDLTRPRHTCVNKLQGHGSPVIGVAWNHGENLLASSDSDGTV 468

Query: 290 IVWKRAKT 267
           IVWKRAKT
Sbjct: 469 IVWKRAKT 476


>gb|ADE76890.1| unknown [Picea sitchensis]
          Length = 357

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = -1

Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291
           LEKGEFIV+GSEDSNVYFYD TRPKH CVNKLQGHGSPVIG+AWNHGEN LASSDS+G V
Sbjct: 288 LEKGEFIVSGSEDSNVYFYDLTRPKHPCVNKLQGHGSPVIGVAWNHGENLLASSDSDGVV 347

Query: 290 IVWKRAK 270
           IVWKRAK
Sbjct: 348 IVWKRAK 354


>gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| TPA: hypothetical
           protein ZEAMMB73_253268 [Zea mays]
          Length = 468

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/68 (86%), Positives = 65/68 (95%)
 Frame = -1

Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291
           LEKGEFIV GSED+NVYFYD  RPK++CVNKLQGHGSPVIG+AWNHGENFLASSDS+GTV
Sbjct: 400 LEKGEFIVTGSEDANVYFYDLARPKNSCVNKLQGHGSPVIGVAWNHGENFLASSDSDGTV 459

Query: 290 IVWKRAKT 267
           IVWKR+KT
Sbjct: 460 IVWKRSKT 467


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/68 (86%), Positives = 62/68 (91%)
 Frame = -1

Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291
           LEKGE+IVAGSEDSNVYFYD TRPKHTCVNKLQGH  PVIG+AWNHGEN LASSD  GTV
Sbjct: 422 LEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGVAWNHGENLLASSDFYGTV 481

Query: 290 IVWKRAKT 267
           IVWKR+KT
Sbjct: 482 IVWKRSKT 489


>gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japonica Group]
          Length = 494

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/66 (86%), Positives = 63/66 (95%)
 Frame = -1

Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291
           LEKGEFIV GSED+NVYFYD TRPK++CVNKLQGHGSPVIG+AW+HGEN LASSDS+GTV
Sbjct: 429 LEKGEFIVTGSEDANVYFYDLTRPKNSCVNKLQGHGSPVIGVAWSHGENLLASSDSDGTV 488

Query: 290 IVWKRA 273
           IVWKRA
Sbjct: 489 IVWKRA 494


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