BLASTX nr result
ID: Coptis25_contig00030462
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030462 (470 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [... 137 7e-31 gb|ADE76890.1| unknown [Picea sitchensis] 132 2e-29 gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| T... 132 3e-29 ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l... 128 4e-28 gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japo... 127 9e-28 >ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera] gi|297744762|emb|CBI38024.3| unnamed protein product [Vitis vinifera] Length = 477 Score = 137 bits (346), Expect = 7e-31 Identities = 62/68 (91%), Positives = 66/68 (97%) Frame = -1 Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291 LEKGE+IVAGSEDSNVYFYD TRP+HTCVNKLQGHGSPVIG+AWNHGEN LASSDS+GTV Sbjct: 409 LEKGEYIVAGSEDSNVYFYDLTRPRHTCVNKLQGHGSPVIGVAWNHGENLLASSDSDGTV 468 Query: 290 IVWKRAKT 267 IVWKRAKT Sbjct: 469 IVWKRAKT 476 >gb|ADE76890.1| unknown [Picea sitchensis] Length = 357 Score = 132 bits (333), Expect = 2e-29 Identities = 60/67 (89%), Positives = 63/67 (94%) Frame = -1 Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291 LEKGEFIV+GSEDSNVYFYD TRPKH CVNKLQGHGSPVIG+AWNHGEN LASSDS+G V Sbjct: 288 LEKGEFIVSGSEDSNVYFYDLTRPKHPCVNKLQGHGSPVIGVAWNHGENLLASSDSDGVV 347 Query: 290 IVWKRAK 270 IVWKRAK Sbjct: 348 IVWKRAK 354 >gb|ACN26802.1| unknown [Zea mays] gi|414880258|tpg|DAA57389.1| TPA: hypothetical protein ZEAMMB73_253268 [Zea mays] Length = 468 Score = 132 bits (332), Expect = 3e-29 Identities = 59/68 (86%), Positives = 65/68 (95%) Frame = -1 Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291 LEKGEFIV GSED+NVYFYD RPK++CVNKLQGHGSPVIG+AWNHGENFLASSDS+GTV Sbjct: 400 LEKGEFIVTGSEDANVYFYDLARPKNSCVNKLQGHGSPVIGVAWNHGENFLASSDSDGTV 459 Query: 290 IVWKRAKT 267 IVWKR+KT Sbjct: 460 IVWKRSKT 467 >ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus] gi|449519860|ref|XP_004166952.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus] Length = 490 Score = 128 bits (322), Expect = 4e-28 Identities = 59/68 (86%), Positives = 62/68 (91%) Frame = -1 Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291 LEKGE+IVAGSEDSNVYFYD TRPKHTCVNKLQGH PVIG+AWNHGEN LASSD GTV Sbjct: 422 LEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGVAWNHGENLLASSDFYGTV 481 Query: 290 IVWKRAKT 267 IVWKR+KT Sbjct: 482 IVWKRSKT 489 >gb|EEE55472.1| hypothetical protein OsJ_03651 [Oryza sativa Japonica Group] Length = 494 Score = 127 bits (319), Expect = 9e-28 Identities = 57/66 (86%), Positives = 63/66 (95%) Frame = -1 Query: 470 LEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGENFLASSDSEGTV 291 LEKGEFIV GSED+NVYFYD TRPK++CVNKLQGHGSPVIG+AW+HGEN LASSDS+GTV Sbjct: 429 LEKGEFIVTGSEDANVYFYDLTRPKNSCVNKLQGHGSPVIGVAWSHGENLLASSDSDGTV 488 Query: 290 IVWKRA 273 IVWKRA Sbjct: 489 IVWKRA 494