BLASTX nr result

ID: Coptis25_contig00030452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030452
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF25984.1|AC013354_3 F15H18.12 [Arabidopsis thaliana]              72   5e-11
ref|NP_173273.2| ATP binding microtubule motor family protein [A...    72   5e-11
ref|XP_002893000.1| hypothetical protein ARALYDRAFT_472057 [Arab...    71   1e-10
ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CBI15491.3| unnamed protein product [Vitis vinifera]               64   1e-08

>gb|AAF25984.1|AC013354_3 F15H18.12 [Arabidopsis thaliana]
          Length = 1003

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 3    CESGNASKEMFELNFALPSDKRQWFLGWDPISNLIHL 113
            CESGN SKEMFELNFA+PSDKRQW +GWD ISNL+HL
Sbjct: 967  CESGNISKEMFELNFAVPSDKRQWNIGWDNISNLLHL 1003


>ref|NP_173273.2| ATP binding microtubule motor family protein [Arabidopsis thaliana]
            gi|19979627|dbj|BAB88748.1| AtNACK1 kinesin-like protein
            [Arabidopsis thaliana] gi|332191587|gb|AEE29708.1| ATP
            binding microtubule motor family protein [Arabidopsis
            thaliana]
          Length = 974

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +3

Query: 3    CESGNASKEMFELNFALPSDKRQWFLGWDPISNLIHL 113
            CESGN SKEMFELNFA+PSDKRQW +GWD ISNL+HL
Sbjct: 938  CESGNISKEMFELNFAVPSDKRQWNIGWDNISNLLHL 974


>ref|XP_002893000.1| hypothetical protein ARALYDRAFT_472057 [Arabidopsis lyrata subsp.
            lyrata] gi|297338842|gb|EFH69259.1| hypothetical protein
            ARALYDRAFT_472057 [Arabidopsis lyrata subsp. lyrata]
          Length = 974

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 3    CESGNASKEMFELNFALPSDKRQWFLGWDPISNLIHL 113
            CESGN SKEMFELNFA+PSD+RQW +GWD ISNL+HL
Sbjct: 938  CESGNISKEMFELNFAVPSDRRQWNIGWDNISNLLHL 974


>ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|222868486|gb|EEF05617.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +3

Query: 3    CESGNASKEMFELNFALPSDKRQWFLGWDPISNLIHL 113
            CE GN SKEMFELNFALP+DKR W +GW+PISN +HL
Sbjct: 929  CEGGNMSKEMFELNFALPTDKRPWIMGWNPISNFLHL 965


>emb|CBI15491.3| unnamed protein product [Vitis vinifera]
          Length = 849

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +3

Query: 3   CESGNASKEMFELNFALPSDKRQWFLGWDPISNLIHL 113
           CES N SKEMFELNF LP+DKR W  GW+ ISNL+HL
Sbjct: 813 CESSNMSKEMFELNFVLPADKRPWVTGWNQISNLLHL 849


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