BLASTX nr result

ID: Coptis25_contig00030443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030443
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = +3

Query: 30   GGSDKVIWSASLHGEF*LKETYHTLRRKRQSVTWWSLVWFANKILRHSFISWMLFQDCIK 209
            G  D++IW  S +  F +K  +  LRR RQ V W  +VWF N + RHSF+ WM+ Q  + 
Sbjct: 842  GQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 901

Query: 210  TLTKLKEQKVVESNLCVIC 266
            T  KL    +   N C +C
Sbjct: 902  TQDKLHRFGIHGPNRCSLC 920


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 30   GGSDKVIWSASLHGEF*LKETYHTLRRKRQSVTWWSLVWFANKILRHSFISWMLFQDCIK 209
            G  D+++W  S +  F +K  +  LRR RQ V W  +VWF N + RHSF+ WM  Q  + 
Sbjct: 1182 GQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 1241

Query: 210  TLTKLKEQKVVESNLCVIC 266
            T  KL    +   N C +C
Sbjct: 1242 TQDKLYRFGIHGPNRCSLC 1260


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/79 (37%), Positives = 42/79 (53%)
 Frame = +3

Query: 30  GGSDKVIWSASLHGEF*LKETYHTLRRKRQSVTWWSLVWFANKILRHSFISWMLFQDCIK 209
           G  D+++W  S +  F +K  +  LRR RQ V W  +VWF N + RHSF+ WM  Q  + 
Sbjct: 309 GQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLT 368

Query: 210 TLTKLKEQKVVESNLCVIC 266
           T  KL    +   N C +C
Sbjct: 369 TQDKLHRFGIHGPNRCSLC 387


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/79 (36%), Positives = 42/79 (53%)
 Frame = +3

Query: 30  GGSDKVIWSASLHGEF*LKETYHTLRRKRQSVTWWSLVWFANKILRHSFISWMLFQDCIK 209
           G  D+++W  S +  F +K  +  LRR R  V W  +VWF N + RHSF+ WM+ Q  + 
Sbjct: 127 GQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLT 186

Query: 210 TLTKLKEQKVVESNLCVIC 266
           T  KL    +   N C +C
Sbjct: 187 TQDKLHRFGIHGPNRCSLC 205


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