BLASTX nr result

ID: Coptis25_contig00030438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030438
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    86   5e-15
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    85   9e-15
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    84   2e-14
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 57/166 (34%), Positives = 84/166 (50%)
 Frame = +3

Query: 6   CKWKLPPSGFIKLNTEGSVAEQLVGYGGLTIDREGNVIFTYSGGGYRRSVFFQELKAIEV 185
           C WK P  G+IKLNT+GSV  Q  G+GGL  D EGN I  +        +F  EL AI  
Sbjct: 272 CIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331

Query: 186 GLTICKENDLNKIQVCSDSLRAIQILNGKERAPWYSMNIVGSTLKLVSHFLEVKFCHVYR 365
           GL +     +  I V SDS+ A++ +N  +     +   +     L+  F E K  H +R
Sbjct: 332 GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWR 391

Query: 366 EVNSSADYLARLSSSANEQCTCNIPPLDSTLAEIVATDVRGKVYLR 503
           E N +ADYL+++    N+     +    +TL  I+  D +G++Y R
Sbjct: 392 ETNKAADYLSKMVLERNDVVLWPV-HFPTTLQNIIKDDAQGRIYCR 436


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   CKWKLPPSGFIKLNTEGSVAEQLVGYGGLTIDREGNVIFTYSGGGYRRSVFFQELKAIEV 185
           C+W  P  G+ KLNT+GS+    V +GGL  D  G  I  +     +  VF  EL AI  
Sbjct: 306 CEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIWR 365

Query: 186 GLTICKENDLNKIQVCSDSLRAIQILNGKERAPWYSMNIVGSTLKLVSHFLEVKFCHVYR 365
           GL +     +  I V SDS+  ++ +N K+  P  ++  +    KL+  F + +  H +R
Sbjct: 366 GLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQIWKLLKKFDKYQISHSWR 424

Query: 366 EVNSSADYLARLSSSANEQCTCNIPPLD--STLAEIVATDVRGKVYLR 503
           E N +AD+LA++   AN+     + P+D   +L+ I+  D +G  Y R
Sbjct: 425 ETNRAADHLAKMDLLANDVV---LSPVDFPPSLSRIIEDDAKGTKYRR 469


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
 Frame = +3

Query: 12  WKLPPSGFIKLNTEGSVAEQLVGYGGLTIDREGNVIFTYSGGGYRRSVFFQELKAIEVGL 191
           W+ P  G+ KLNT+GS+     G+GGL  D  G+ I  Y+   ++  +F  EL AI  GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 192 TICKENDLNKIQVCSDSLRAIQILNGKERAPWYSMNIVGSTLKLVSHFLEVKFCHVYREV 371
            +     +  I V SDS+ A++ +N K+     + + +     L+  F +    H +RE 
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRET 387

Query: 372 NSSADYLARLSSSANEQC--TCNIPPLDSTLAEIVATDVRGKVYLR 503
           N +AD+L+++  S N+    T + P   + L  I+  D  G++Y R
Sbjct: 388 NKAADFLSKMDLSGNDVVLGTADFP---NGLNSIIKDDAEGRMYRR 430


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
 Frame = +3

Query: 12  WKLPPSGFIKLNTEGSVAEQLVGYGGLTIDREGNVIFTYSGGGYRRSVFFQELKAIEVGL 191
           W+ P  G+ KLNT+GS+     G+GGL  D  G+ I  Y+   ++  +F  EL AI  GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 192 TICKENDLNKIQVCSDSLRAIQILNGKERAPWYSMNIVGSTLKLVSHFLEVKFCHVYREV 371
            +     +  I V SDS+  ++ +N K+     + + +     L+  F + +  H +RE 
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRET 274

Query: 372 NSSADYLARLSSSANEQC--TCNIPPLDSTLAEIVATDVRGKVYLR 503
           N +AD+L+R+  S ++    T + P   + L  I+  D  G++Y R
Sbjct: 275 NKAADFLSRMDLSGSDVVLGTADFP---NGLNSIIKDDAEGRMYRR 317


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = +3

Query: 6   CKWKLPPSGFIKLNTEGSVAEQLVGYGGLTIDREGNVIFTYSGGGYRRSVFFQELKAIEV 185
           C+WK P  G+IKLNT+GS+  +  G GGL  D EGN I  +        +F  EL AI  
Sbjct: 165 CQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224

Query: 186 GLTICKENDLNKIQVCSDSLRAIQILNGKERAPWYSMNIVGSTLKLVSHFLEVKFCHVYR 365
           GL +     +  + V SDSL  +  +N ++     +   +     L+  F + K  H +R
Sbjct: 225 GLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWR 284

Query: 366 EVNSSADYLARLSSSANEQCTCNIPPLD--STLAEIVATDVRGKVYLR 503
           E N +ADYLA++    +      + P D  ++L  I+  D  G VY R
Sbjct: 285 ETNRAADYLAKMVVERD----VVLWPADFPTSLNNIIKDDAEGMVYCR 328


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