BLASTX nr result

ID: Coptis25_contig00030437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030437
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|2...   255   1e-65
ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789...   244   2e-62
emb|CAI46244.1| Myb-like protein [Humulus lupulus]                    237   3e-60
ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycin...   236   8e-60
gb|ABH02912.1| MYB transcription factor MYB71 [Glycine max]           234   2e-59

>ref|XP_002309524.1| predicted protein [Populus trichocarpa] gi|222855500|gb|EEE93047.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  255 bits (651), Expect = 1e-65
 Identities = 143/289 (49%), Positives = 173/289 (59%), Gaps = 16/289 (5%)
 Frame = -3

Query: 852 MGRAPCCDKANVKRGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLN 673
           MGRAPCCDKANVKRGPWSPEED  LK+Y+E HGTGGNWI+LPQKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDATLKSYLETHGTGGNWIALPQKAGLKRCGKSCRLRWLN 60

Query: 672 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 493
           YLRPDIKHGGFTEEEDN+IC+LY  +GSRWS+IA+QL GRTDNDVKNYWNTKLKKKILAG
Sbjct: 61  YLRPDIKHGGFTEEEDNIICTLYSQMGSRWSLIAAQLPGRTDNDVKNYWNTKLKKKILAG 120

Query: 492 KITL-------NGEKMLTSNNHLQPXXXXSLAMHNASQNDNKCFSSY--LIQNSTTVPMS 340
           KI+L       N    + +   +       L +  A    +  FS +  L Q S T+P  
Sbjct: 121 KISLTIKNNPINAPVNVANIPAIPCSTSPILYVPKAETESSVTFSDHYSLTQISGTLPAL 180

Query: 339 MN------VNVGSSRLLPNSVKL-TFPGLVDSPEFXXXXXXXXXXXXXXXXXXXSLPIPL 181
            +      +N  +  L PN  +  +FPG++D  EF                   S+    
Sbjct: 181 SDIGYEPIINSTAQNLSPNQFQFSSFPGVIDMSEF----SMNSTHIVSPSQEGSSISDSS 236

Query: 180 AVPLDXXXXXXXXXXXSDEDDRFFMEFGFGSSYDLFNGFCFQERTSGAA 34
           ++ +D             ED   FM+   G   D FNG   Q++ S  A
Sbjct: 237 SLAMDNKGLSVPSTNGGLEDVGIFMDSEPGFPSDFFNGLLLQDKASEVA 285


>ref|XP_003550294.1| PREDICTED: uncharacterized protein LOC100789985 [Glycine max]
          Length = 309

 Score =  244 bits (624), Expect = 2e-62
 Identities = 119/174 (68%), Positives = 134/174 (77%)
 Frame = -3

Query: 852 MGRAPCCDKANVKRGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLN 673
           MGRAPCCDKANVKRGPWSPEED  LKNYVE HGTGGNWI+LP+KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDATLKNYVETHGTGGNWIALPKKAGLRRCGKSCRLRWLN 60

Query: 672 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 493
           YLRPDIKHGGFTEEEDN+IC+LY  +GSRWS IAS+L GRTDNDVKNYWNTKLKKKI+A 
Sbjct: 61  YLRPDIKHGGFTEEEDNIICTLYAQMGSRWSAIASKLPGRTDNDVKNYWNTKLKKKIMAR 120

Query: 492 KITLNGEKMLTSNNHLQPXXXXSLAMHNASQNDNKCFSSYLIQNSTTVPMSMNV 331
           K+TL   K LT N+ L P      ++ N         S +  QN  + P  + V
Sbjct: 121 KVTL---KTLTHNDTL-PSTSTPSSLTNNQNVKTSQNSPFPSQNQNSPPSVLPV 170


>emb|CAI46244.1| Myb-like protein [Humulus lupulus]
          Length = 264

 Score =  237 bits (604), Expect = 3e-60
 Identities = 115/175 (65%), Positives = 129/175 (73%)
 Frame = -3

Query: 852 MGRAPCCDKANVKRGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLN 673
           MGRAPCCDK  VKRGPWSPEED ALK+Y+  +GTGGNWI+LP KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDAALKHYMHNNGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 672 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKILAG 493
           YLRPDIKHGGFTEEEDNV+ +LY NIGSRWSVIASQL GRTDNDVKN+WNTKLKKK+LA 
Sbjct: 61  YLRPDIKHGGFTEEEDNVVWTLYSNIGSRWSVIASQLPGRTDNDVKNHWNTKLKKKLLAR 120

Query: 492 KITLNGEKMLTSNNHLQPXXXXSLAMHNASQNDNKCFSSYLIQNSTTVPMSMNVN 328
               N     T + +L           N+ Q +    S+Y   NS T+P  MN N
Sbjct: 121 STNCNETTNTTDHLNLARFSPLIPKTENSDQGN----SAYCYTNSDTLPYLMNGN 171


>ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycine max]
          Length = 339

 Score =  236 bits (601), Expect = 8e-60
 Identities = 112/168 (66%), Positives = 131/168 (77%), Gaps = 8/168 (4%)
 Frame = -3

Query: 852 MGRAPCCDKANVKRGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLN 673
           MGRAPCCDKANVK+GPWSPEED ALK Y+E++GTGGNWI+LPQK GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 672 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKI--- 502
           YLRP+IKHGGFTEEEDN+ICSLY +IGSRWS+IA+QL GRTDND+KNYWNT+LKKK+   
Sbjct: 61  YLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGR 120

Query: 501 -----LAGKITLNGEKMLTSNNHLQPXXXXSLAMHNASQNDNKCFSSY 373
                L+ K T NG +  + +N L       L +H   Q+    FS Y
Sbjct: 121 RKQSNLSAKDTNNGIEENSYSNALSSSALERLQLHMQLQSLQNPFSFY 168


>gb|ABH02912.1| MYB transcription factor MYB71 [Glycine max]
          Length = 209

 Score =  234 bits (597), Expect = 2e-59
 Identities = 111/168 (66%), Positives = 131/168 (77%), Gaps = 8/168 (4%)
 Frame = -3

Query: 852 MGRAPCCDKANVKRGPWSPEEDFALKNYVERHGTGGNWISLPQKAGLKRCGKSCRLRWLN 673
           MGRAPCCDKANVK+GPWSPEED ALK Y+E++GTGGNWI+LPQK GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLERCGKSCRLRWLN 60

Query: 672 YLRPDIKHGGFTEEEDNVICSLYKNIGSRWSVIASQLQGRTDNDVKNYWNTKLKKKI--- 502
           YLRP+IKHGGFTEEEDN+ICSLY +IGSRWS+IA+QL GRTDND+KNYWNT+LKKK+   
Sbjct: 61  YLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGR 120

Query: 501 -----LAGKITLNGEKMLTSNNHLQPXXXXSLAMHNASQNDNKCFSSY 373
                L+ K T NG +  + +N L       L +H   Q+    FS Y
Sbjct: 121 RKQSNLSAKDTNNGIEENSYSNALSSSALERLQLHMQLQSLQNPFSFY 168


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