BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030423
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   170   1e-40
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   162   3e-38
ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cuc...   154   6e-36

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/114 (70%), Positives = 93/114 (81%)
 Frame = +2

Query: 2   RFNRWQDSQRFLVNLCNEVSLRLQGCGVQGXXXXXXXXXXXXDAEEPAKYMGCGDCENLS 181
           RFN  +DS+ FLVNLC EV+LRL+GCGVQG            DA EPAKYMGCGDCENLS
Sbjct: 646 RFNDLKDSRHFLVNLCKEVTLRLKGCGVQGRTFTLKMKKRRKDAGEPAKYMGCGDCENLS 705

Query: 182 HSVTIPVATDDVDVLQRISKQLFGYFQLDVKDIRGVGLQVSRLENADLASQGHE 343
           HS+T+P+ATDDVDV+QRI+ QLFG+F +DVKDIRG+GLQVSRLENAD A QGH+
Sbjct: 706 HSMTVPLATDDVDVIQRIATQLFGFFHIDVKDIRGIGLQVSRLENADTAKQGHQ 759


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/114 (70%), Positives = 93/114 (81%)
 Frame = +2

Query: 2   RFNRWQDSQRFLVNLCNEVSLRLQGCGVQGXXXXXXXXXXXXDAEEPAKYMGCGDCENLS 181
           RFN  +DS+ FLVNLC EV+LRL+GCGVQG            DA EPAKYMGCGDCENLS
Sbjct: 624 RFNDLKDSRHFLVNLCKEVTLRLKGCGVQGRTFTLKMKKRRKDAGEPAKYMGCGDCENLS 683

Query: 182 HSVTIPVATDDVDVLQRISKQLFGYFQLDVKDIRGVGLQVSRLENADLASQGHE 343
           HS+T+P+ATDDVDV+QRI+ QLFG+F +DVKDIRG+GLQVSRLENAD A QGH+
Sbjct: 684 HSMTVPLATDDVDVIQRIATQLFGFFHIDVKDIRGIGLQVSRLENADTAKQGHQ 737


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/109 (72%), Positives = 87/109 (79%)
 Frame = +2

Query: 2   RFNRWQDSQRFLVNLCNEVSLRLQGCGVQGXXXXXXXXXXXXDAEEPAKYMGCGDCENLS 181
           RF   QDSQ FL+NLC EVSLRLQGCGV G            DA EP KYMGCGDCENLS
Sbjct: 615 RFRNLQDSQHFLLNLCKEVSLRLQGCGVHGRTFTLKIKKRRKDAGEPTKYMGCGDCENLS 674

Query: 182 HSVTIPVATDDVDVLQRISKQLFGYFQLDVKDIRGVGLQVSRLENADLA 328
           HS+T+PVATDDVDVLQRI+KQLFG F LDVK+IRGVGLQVS+LENAD++
Sbjct: 675 HSMTVPVATDDVDVLQRIAKQLFGSFNLDVKEIRGVGLQVSKLENADIS 723


>ref|XP_002313880.1| predicted protein [Populus trichocarpa] gi|222850288|gb|EEE87835.1|
            predicted protein [Populus trichocarpa]
          Length = 1191

 Score =  156 bits (394), Expect = 2e-36
 Identities = 91/180 (50%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
 Frame = +2

Query: 2    RFNRWQDSQRFLVNLCNEVSLRLQGCGVQGXXXXXXXXXXXXDAEEPAKYMGCGDCENLS 181
            RF   QDSQ FL+NLC EVS RLQGC VQG            DA EPAKYMGCGDCENLS
Sbjct: 690  RFKDLQDSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRRKDAGEPAKYMGCGDCENLS 749

Query: 182  HSVTIPVATDDVDVLQRISKQLFGYFQLDVKDIRGVGLQVSRLENADLASQGHEXXXXXX 361
            HS+T+P+A DDV+ LQRI+KQLFG F LDVKDIRGVGLQVS+LENAD + Q  E      
Sbjct: 750  HSMTVPIAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVSKLENADPSKQVLERNSLRS 809

Query: 362  XXXXXXXNMEEPIS-----SSKERIDGEIPLLEGQHGTVSMKLAKPHYDGDSSKFVKNST 526
                     E+  S       + RID E+  + G  G +      P   G S++   NS+
Sbjct: 810  WLTSSSATTEKGCSINSMDKERARIDSEVKNMIGTSGQLF-----PDQTGFSAQVDTNSS 864


>ref|XP_004137093.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1155

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/112 (63%), Positives = 89/112 (79%)
 Frame = +2

Query: 2    RFNRWQDSQRFLVNLCNEVSLRLQGCGVQGXXXXXXXXXXXXDAEEPAKYMGCGDCENLS 181
            RF  ++D Q FL+NLC EVSLRL GCGVQG            +A+EP KYMGCGDCENLS
Sbjct: 681  RFKDFKDCQCFLLNLCKEVSLRLNGCGVQGRTFTLKIKKRRKNADEPTKYMGCGDCENLS 740

Query: 182  HSVTIPVATDDVDVLQRISKQLFGYFQLDVKDIRGVGLQVSRLENADLASQG 337
            HS+T+PVATDD+++LQRI KQLFG+F +DVK+IRG+GLQVS+L+N D++ QG
Sbjct: 741  HSLTVPVATDDLEILQRIVKQLFGFFVIDVKEIRGIGLQVSKLQNVDISRQG 792