BLASTX nr result

ID: Coptis25_contig00030421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030421
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32077.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containin...   167   2e-39
ref|XP_003517868.1| PREDICTED: uncharacterized protein LOC100808...   157   1e-36
ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containin...   149   4e-34
ref|XP_003613422.1| MYND finger family protein [Medicago truncat...   149   5e-34

>emb|CBI32077.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  167 bits (422), Expect = 2e-39
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = +1

Query: 1   DSLPHFVFAANAGLAAYSSWLPTIELIKEMDVPAVFSDYCEEAAHLAASCISTVTGCPLT 180
           DS+PH V A NAG+AAYSSWLPTIELIKE++VPAVFSDYCEEA+HLA+ CISTVTG P+T
Sbjct: 285 DSIPHLVIAPNAGIAAYSSWLPTIELIKELNVPAVFSDYCEEASHLASCCISTVTGHPMT 344

Query: 181 IPIQLNPFRQPMAVEDSALLLPCYANCFLFGI 276
           IPIQLNPFRQPM +EDSAL LPCY+NCFLFGI
Sbjct: 345 IPIQLNPFRQPMVIEDSALFLPCYSNCFLFGI 376


>ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Vitis vinifera]
          Length = 369

 Score =  167 bits (422), Expect = 2e-39
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = +1

Query: 1   DSLPHFVFAANAGLAAYSSWLPTIELIKEMDVPAVFSDYCEEAAHLAASCISTVTGCPLT 180
           DS+PH V A NAG+AAYSSWLPTIELIKE++VPAVFSDYCEEA+HLA+ CISTVTG P+T
Sbjct: 278 DSIPHLVIAPNAGIAAYSSWLPTIELIKELNVPAVFSDYCEEASHLASCCISTVTGHPMT 337

Query: 181 IPIQLNPFRQPMAVEDSALLLPCYANCFLFGI 276
           IPIQLNPFRQPM +EDSAL LPCY+NCFLFGI
Sbjct: 338 IPIQLNPFRQPMVIEDSALFLPCYSNCFLFGI 369


>ref|XP_003517868.1| PREDICTED: uncharacterized protein LOC100808017 [Glycine max]
          Length = 380

 Score =  157 bits (398), Expect = 1e-36
 Identities = 69/92 (75%), Positives = 81/92 (88%)
 Frame = +1

Query: 1   DSLPHFVFAANAGLAAYSSWLPTIELIKEMDVPAVFSDYCEEAAHLAASCISTVTGCPLT 180
           DS PH + A N G+AAYSSWLP+IELIK++DVP VF+DYCEEA HLAA+CI TVTG PL 
Sbjct: 289 DSFPHLIIAPNGGIAAYSSWLPSIELIKKIDVPVVFTDYCEEACHLAANCIKTVTGSPLK 348

Query: 181 IPIQLNPFRQPMAVEDSALLLPCYANCFLFGI 276
           +P+QLNPFRQPMAVEDS LLLPCY+NC+LFG+
Sbjct: 349 LPVQLNPFRQPMAVEDSVLLLPCYSNCYLFGM 380


>ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Cucumis sativus] gi|449478708|ref|XP_004155398.1|
           PREDICTED: zinc finger MYND domain-containing protein
           15-like [Cucumis sativus]
          Length = 376

 Score =  149 bits (376), Expect = 4e-34
 Identities = 65/91 (71%), Positives = 78/91 (85%)
 Frame = +1

Query: 1   DSLPHFVFAANAGLAAYSSWLPTIELIKEMDVPAVFSDYCEEAAHLAASCISTVTGCPLT 180
           D  PH + A NAG+AAYSSWLPTIE IKE+ VPA+FSD+CEEA HL ASC+S+V G P+T
Sbjct: 285 DCYPHLIIAPNAGIAAYSSWLPTIEFIKEIKVPAIFSDFCEEACHLGASCLSSVIGRPIT 344

Query: 181 IPIQLNPFRQPMAVEDSALLLPCYANCFLFG 273
            PIQLNPFRQP+A+ED+AL LPCY+NCFL+G
Sbjct: 345 FPIQLNPFRQPIAMEDTALFLPCYSNCFLYG 375


>ref|XP_003613422.1| MYND finger family protein [Medicago truncatula]
           gi|355514757|gb|AES96380.1| MYND finger family protein
           [Medicago truncatula]
          Length = 442

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/104 (68%), Positives = 81/104 (77%), Gaps = 12/104 (11%)
 Frame = +1

Query: 1   DSLPHFVFAANAGLAAYSSWLPTI------------ELIKEMDVPAVFSDYCEEAAHLAA 144
           DS PH + A N G+AAYSSWLP+I            ELI ++DVPAVF+DYCEEA HLAA
Sbjct: 339 DSFPHLIIAPNGGIAAYSSWLPSIVCVPSFVYPMRHELIGKIDVPAVFTDYCEEACHLAA 398

Query: 145 SCISTVTGCPLTIPIQLNPFRQPMAVEDSALLLPCYANCFLFGI 276
           SCI TVTG PL +P+QLNPFRQP+AVEDS LLLPCY+NCFLFGI
Sbjct: 399 SCIKTVTGRPLRLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGI 442


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