BLASTX nr result

ID: Coptis25_contig00030417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030417
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298610.1| predicted protein [Populus trichocarpa] gi|2...   312   8e-83
emb|CBI40057.3| unnamed protein product [Vitis vinifera]              308   1e-81
emb|CBI27581.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_002270234.1| PREDICTED: uncharacterized protein LOC100266...   308   1e-81
ref|XP_002509546.1| conserved hypothetical protein [Ricinus comm...   299   7e-79

>ref|XP_002298610.1| predicted protein [Populus trichocarpa] gi|222845868|gb|EEE83415.1|
            predicted protein [Populus trichocarpa]
          Length = 490

 Score =  312 bits (800), Expect = 8e-83
 Identities = 167/302 (55%), Positives = 213/302 (70%), Gaps = 5/302 (1%)
 Frame = +2

Query: 2    WKKAIEDAYEKLCPVRAGGHDCVCLPALGRLILVECVGRLDVAMFNALLRESAEKLPTDP 181
            WKKA +DA E+LCPVRAGGH+C CLP L RLI+ +CV RLDVAMFNA+LRES +++PTDP
Sbjct: 189  WKKAFKDACERLCPVRAGGHECGCLPVLARLIMEQCVARLDVAMFNAILRESVDEIPTDP 248

Query: 182  VSDPISNSAVLPVSAGKFSFGTGAQLKKVIGIWSSSLTDLFGTLDGNSKADANKLISDDK 361
            VSDPIS+  VLP+ AG  SFG GAQLK VIG WS  LTDLFG  D +   D N+    D+
Sbjct: 249  VSDPISDPKVLPIPAGSSSFGAGAQLKNVIGNWSRWLTDLFGMDDDDLLEDDNENDEIDE 308

Query: 362  QQVEPSFKFHLLNELSDLLMLPKDMLLSYSFRKEVCPTFAATLIKRVLNNFVPDEFCPYQ 541
            +       FHLLN LSDL+MLPKDMLLS S RKEVCPTFAA LIKRVL+NFV DEFCP  
Sbjct: 309  RPDTTFKPFHLLNALSDLMMLPKDMLLSKSIRKEVCPTFAAPLIKRVLDNFVLDEFCPDP 368

Query: 542  TPEAMFKTLGSEELEDKGKESIRYIQQNAILPVYMPISTASVASIL---QVQSDLERNKS 712
             P+ +F+ L +E+  + G+ES+  +   A  P+Y+P S AS+A I+     QS L ++ S
Sbjct: 369  IPDVVFEALDTEDAIEAGEESVTTVPCIAAPPIYLPPSAASIAKIIGEFGSQSKLRKSGS 428

Query: 713  LVQRKSNSSDDELDAVDSPFSSIIHNKSHVSRFSRK-AGEIRRGV-NIVRYELLREVWME 886
             + RKS +SDDELD ++SP +SII +    S    K + + ++G+ N +RYELLRE+WM 
Sbjct: 429  SIVRKSYTSDDELDELNSPLASIILDGVRSSPAPTKPSWKSKKGIDNTIRYELLREIWMN 488

Query: 887  ED 892
             +
Sbjct: 489  SE 490


>emb|CBI40057.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  308 bits (789), Expect = 1e-81
 Identities = 173/304 (56%), Positives = 210/304 (69%), Gaps = 7/304 (2%)
 Frame = +2

Query: 2    WKKAIEDAYEKLCPVRAGGHDCVCLPALGRLILVECVGRLDVAMFNALLRESAEKLPTDP 181
            WKKA +DA E+LCPVRAGGH+C CLP L  L++ +CV RLDVAMFNA+LRES +++PTDP
Sbjct: 610  WKKAFKDACERLCPVRAGGHECGCLPVLASLVMEQCVVRLDVAMFNAILRESVDEIPTDP 669

Query: 182  VSDPISNSAVLPVSAGKFSFGTGAQLKKVIGIWSSSLTDLFGTLDGNSKADANKLISDDK 361
            VSDPIS+S VLP+ AGK SFG GAQLK VIG WS  LTDLFG  + +   + N  I D++
Sbjct: 670  VSDPISDSKVLPIPAGKSSFGAGAQLKNVIGNWSRWLTDLFGMDEDDLLEEGNDDIEDER 729

Query: 362  QQVEPSFK-FHLLNELSDLLMLPKDMLLSYSFRKEVCPTFAATLIKRVLNNFVPDEFCPY 538
            Q V   FK FHLLN LSDL+MLPKDMLLS S RKEVCPTF A LI+RVL+NFVPDEFCP 
Sbjct: 730  QDV--LFKSFHLLNALSDLMMLPKDMLLSRSIRKEVCPTFGAPLIRRVLDNFVPDEFCPD 787

Query: 539  QTPEAMFKTLGSEELEDKGKESIRYIQQNAILPVYMPISTASVASILQV---QSDLERNK 709
              P  +F+ L SE+  + G++SI      A   VY P   AS+ASIL     QS L R+ 
Sbjct: 788  PIPGVVFEALDSEDPFEAGEDSITNFPCIAAPIVYAPPPAASLASILGEVGNQSHLRRSN 847

Query: 710  SLVQRKSNSSDDELDAVDSPFSSIIHN---KSHVSRFSRKAGEIRRGVNIVRYELLREVW 880
            S V RKS++SDDEL+ ++SP SSII +    S V   S          + VRY+LLREVW
Sbjct: 848  SSVLRKSHTSDDELEELNSPLSSIISDGFRPSPVPTKSNWKSRANGSQSDVRYQLLREVW 907

Query: 881  MEED 892
            M  +
Sbjct: 908  MNSE 911


>emb|CBI27581.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  308 bits (789), Expect = 1e-81
 Identities = 167/301 (55%), Positives = 209/301 (69%), Gaps = 6/301 (1%)
 Frame = +2

Query: 2    WKKAIEDAYEKLCPVRAGGHDCVCLPALGRLILVECVGRLDVAMFNALLRESAEKLPTDP 181
            WK+A +DA E+LCP RAGGH+C CLP L RL++ + V RLDV MFNA+LRESAE++PTDP
Sbjct: 442  WKRAFKDACERLCPTRAGGHECGCLPVLSRLVMEQLVSRLDVGMFNAILRESAEEMPTDP 501

Query: 182  VSDPISNSAVLPVSAGKFSFGTGAQLKKVIGIWSSSLTDLFGTLDGNSKADANKLISDDK 361
            VSDPI +S VLP+ AGK SFG GAQLK  +G WS  LTDLFG  D ++  D N+   D +
Sbjct: 502  VSDPICDSKVLPIPAGKSSFGAGAQLKNAVGNWSRWLTDLFGIDDNDAPGDTNEFSDDKR 561

Query: 362  QQVEPSFK-FHLLNELSDLLMLPKDMLLSYSFRKEVCPTFAATLIKRVLNNFVPDEFCPY 538
             + E SFK FHLLN LSDL+MLP +ML   S RKEVCPTF   +I+RVL+NFVPDEFCP 
Sbjct: 562  LKCETSFKVFHLLNALSDLMMLPFEMLADRSTRKEVCPTFGVPIIRRVLDNFVPDEFCPD 621

Query: 539  QTPEAMFKTLGSEELEDKGKESIRYIQQNAILPVYMPISTASVASIL-QVQS-DLERNKS 712
              PE +F+TL SE+  +  +ESI      A  PVY P S AS ASI+ +V S  L+R+ S
Sbjct: 622  PIPEVIFETLDSEDSLEGAEESITSFPCIATPPVYSPPSAASFASIIGEVGSQSLQRSGS 681

Query: 713  LVQRKSNSSDDELDAVDSPFSSIIHNKSHVSRFSRKAGEIRRGV---NIVRYELLREVWM 883
             + RKS  SDDELD +DSP +SII + S  +  S K   + +G    ++VRY LLREVW 
Sbjct: 682  SLLRKSYISDDELDELDSPITSIIGDNSRGTPTSTKPSWLPKGKGGRDVVRYRLLREVWR 741

Query: 884  E 886
            +
Sbjct: 742  D 742


>ref|XP_002270234.1| PREDICTED: uncharacterized protein LOC100266440 [Vitis vinifera]
          Length = 1114

 Score =  308 bits (789), Expect = 1e-81
 Identities = 173/304 (56%), Positives = 210/304 (69%), Gaps = 7/304 (2%)
 Frame = +2

Query: 2    WKKAIEDAYEKLCPVRAGGHDCVCLPALGRLILVECVGRLDVAMFNALLRESAEKLPTDP 181
            WKKA +DA E+LCPVRAGGH+C CLP L  L++ +CV RLDVAMFNA+LRES +++PTDP
Sbjct: 813  WKKAFKDACERLCPVRAGGHECGCLPVLASLVMEQCVVRLDVAMFNAILRESVDEIPTDP 872

Query: 182  VSDPISNSAVLPVSAGKFSFGTGAQLKKVIGIWSSSLTDLFGTLDGNSKADANKLISDDK 361
            VSDPIS+S VLP+ AGK SFG GAQLK VIG WS  LTDLFG  + +   + N  I D++
Sbjct: 873  VSDPISDSKVLPIPAGKSSFGAGAQLKNVIGNWSRWLTDLFGMDEDDLLEEGNDDIEDER 932

Query: 362  QQVEPSFK-FHLLNELSDLLMLPKDMLLSYSFRKEVCPTFAATLIKRVLNNFVPDEFCPY 538
            Q V   FK FHLLN LSDL+MLPKDMLLS S RKEVCPTF A LI+RVL+NFVPDEFCP 
Sbjct: 933  QDV--LFKSFHLLNALSDLMMLPKDMLLSRSIRKEVCPTFGAPLIRRVLDNFVPDEFCPD 990

Query: 539  QTPEAMFKTLGSEELEDKGKESIRYIQQNAILPVYMPISTASVASILQV---QSDLERNK 709
              P  +F+ L SE+  + G++SI      A   VY P   AS+ASIL     QS L R+ 
Sbjct: 991  PIPGVVFEALDSEDPFEAGEDSITNFPCIAAPIVYAPPPAASLASILGEVGNQSHLRRSN 1050

Query: 710  SLVQRKSNSSDDELDAVDSPFSSIIHN---KSHVSRFSRKAGEIRRGVNIVRYELLREVW 880
            S V RKS++SDDEL+ ++SP SSII +    S V   S          + VRY+LLREVW
Sbjct: 1051 SSVLRKSHTSDDELEELNSPLSSIISDGFRPSPVPTKSNWKSRANGSQSDVRYQLLREVW 1110

Query: 881  MEED 892
            M  +
Sbjct: 1111 MNSE 1114


>ref|XP_002509546.1| conserved hypothetical protein [Ricinus communis]
            gi|223549445|gb|EEF50933.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1002

 Score =  299 bits (766), Expect = 7e-79
 Identities = 172/305 (56%), Positives = 211/305 (69%), Gaps = 8/305 (2%)
 Frame = +2

Query: 2    WKKAIEDAYEKLCPVRAGGHDCVCLPALGRLILVECVGRLDVAMFNALLRESAEKLPTDP 181
            WKKA +DA E+LCPVRAGGH+C CL  L RLI+ +CV RLDVAMFNA+LRESA+++PTDP
Sbjct: 702  WKKAFKDACERLCPVRAGGHECGCLSVLARLIMEQCVARLDVAMFNAILRESADEIPTDP 761

Query: 182  VSDPISNSAVLPVSAGKFSFGTGAQLKKVIGIWSSSLTDLFGTLDGNSKADANKLISDDK 361
            VSDPIS+S VLP+ AG+ SFG GAQLK  IG WS  LTDLFG +D +   D      DD+
Sbjct: 762  VSDPISDSKVLPIPAGRSSFGAGAQLKTTIGNWSRWLTDLFG-IDDDLLEDEKDEDGDDE 820

Query: 362  QQVEPSFK-FHLLNELSDLLMLPKDMLLSYSFRKEVCPTFAATLIKRVLNNFVPDEFCPY 538
            ++ + SFK FHLLN LSDL+MLPKDMLLS S RKEVCP F   LIKRVL+NFV DEFCP 
Sbjct: 821  RR-DTSFKSFHLLNALSDLMMLPKDMLLSRSIRKEVCPAFGTPLIKRVLDNFVSDEFCPD 879

Query: 539  QTPEAMFKTLGSEELEDKGKESIRYIQQNAILPVYMPISTASVASILQV---QSDLERNK 709
              P+ + + LGSE+  D  +ES+  I   A  P+Y+P + ASV   +     QS L R+ 
Sbjct: 880  PIPDVVLEALGSEDPVDVEEESVTSIPCIAAPPLYLPPAAASVGDTIGQSGNQSQLRRSG 939

Query: 710  SLVQRKSNSSDDELDAVDSPFSSIIHNKSH----VSRFSRKAGEIRRGVNIVRYELLREV 877
            SL+ RKS +SDDELD + SP +SI  + S      S  S K+ EI    N +RYELLREV
Sbjct: 940  SLL-RKSYASDDELDELISPLASIFLDGSRSSPASSTLSWKSKEI-GNQNPIRYELLREV 997

Query: 878  WMEED 892
            WM  +
Sbjct: 998  WMNSE 1002


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