BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030414
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum] gi|...   198   6e-49
ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80...   189   4e-46
ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80...   186   2e-45
emb|CBI36284.3| unnamed protein product [Vitis vinifera]              186   2e-45
gb|ABM67700.1| polygalacturonase [Citrus sinensis]                    184   9e-45

>ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum]
           gi|7381227|gb|AAF61444.1|AF138858_1 polygalacturonase
           [Solanum lycopersicum]
          Length = 452

 Score =  198 bits (503), Expect = 6e-49
 Identities = 93/172 (54%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
 Frame = +1

Query: 55  RKLSAFSHLIFLYFIANVSNGDGFDPVIKL-PQFQSLXXXXXXXXXXXXHHFGAKGDGIY 231
           + ++ F  L  LYF+   +N  GF+ +++L P   SL            + FGA GDGI 
Sbjct: 19  KSVALFLSLYSLYFLLISANVSGFESLLQLLPASASLRTKSESLFRV--NDFGATGDGIT 76

Query: 232 NDTQAFKDAWEIACSSPLRFTIEVPSGSSFLVGPIEFAGPCRSKVTLRVTGNIIAPKDPR 411
           +DT++FKD W++ACSSP    I +P+G SFLV  I FAGPCRSKV++R+ G I+APKDP 
Sbjct: 77  DDTKSFKDVWDMACSSPSHAKIVIPAGYSFLVRQINFAGPCRSKVSIRIAGTILAPKDPD 136

Query: 412 AWDGLNPRKWLYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 567
            WD LNPRKW+YF  VKHLT++GGG+I GMG+EWW+RSCKVN +NPC HAPT
Sbjct: 137 VWDDLNPRKWIYFFKVKHLTVEGGGIIDGMGQEWWARSCKVNRTNPCHHAPT 188


>ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
          Length = 443

 Score =  189 bits (479), Expect = 4e-46
 Identities = 84/163 (51%), Positives = 113/163 (69%)
 Frame = +1

Query: 79  LIFLYFIANVSNGDGFDPVIKLPQFQSLXXXXXXXXXXXXHHFGAKGDGIYNDTQAFKDA 258
           +IF++    V++ +G DPVI+LP+                  +GAKGDG++NDT+AF +A
Sbjct: 14  IIFIHINILVTHAEGVDPVIQLPRSGLKRTRTRSKWVLSVGDYGAKGDGLHNDTEAFLEA 73

Query: 259 WEIACSSPLRFTIEVPSGSSFLVGPIEFAGPCRSKVTLRVTGNIIAPKDPRAWDGLNPRK 438
           W+IACS     ++  P G +FLV P++  GPCRSK+TLR++G I+AP+DP  W GLN RK
Sbjct: 74  WKIACSLSGFISVVFPYGKTFLVHPVDIGGPCRSKITLRISGTIVAPQDPVVWHGLNQRK 133

Query: 439 WLYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 567
           WLYF  V HLT+DGGG I GMG+EWW+RSCK+N +NPC  APT
Sbjct: 134 WLYFHGVNHLTVDGGGRINGMGQEWWARSCKINSTNPCHPAPT 176


>ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 452

 Score =  186 bits (472), Expect = 2e-45
 Identities = 81/162 (50%), Positives = 112/162 (69%)
 Frame = +1

Query: 82  IFLYFIANVSNGDGFDPVIKLPQFQSLXXXXXXXXXXXXHHFGAKGDGIYNDTQAFKDAW 261
           +F++ +  + N +GF+P+I+LP   +             + FGAKGDG+ +DT AF++AW
Sbjct: 27  VFIFLVLFLINVEGFEPLIQLPHSPAARPRLETKILYV-NQFGAKGDGVQDDTDAFRNAW 85

Query: 262 EIACSSPLRFTIEVPSGSSFLVGPIEFAGPCRSKVTLRVTGNIIAPKDPRAWDGLNPRKW 441
           +IAC+S  + +I +P    FLV PI F GPCR+KVT+ ++G IIAPKDP  W GLNP+KW
Sbjct: 86  KIACASITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDVWHGLNPQKW 145

Query: 442 LYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 567
           LYF  V HLT+ G G+I G G +WWS+SCK+N +NPC HAPT
Sbjct: 146 LYFHGVNHLTVRGSGIINGRGHKWWSQSCKINATNPCEHAPT 187


>emb|CBI36284.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  186 bits (472), Expect = 2e-45
 Identities = 81/162 (50%), Positives = 112/162 (69%)
 Frame = +1

Query: 82  IFLYFIANVSNGDGFDPVIKLPQFQSLXXXXXXXXXXXXHHFGAKGDGIYNDTQAFKDAW 261
           +F++ +  + N +GF+P+I+LP   +             + FGAKGDG+ +DT AF++AW
Sbjct: 16  VFIFLVLFLINVEGFEPLIQLPHSPAARPRLETKILYV-NQFGAKGDGVQDDTDAFRNAW 74

Query: 262 EIACSSPLRFTIEVPSGSSFLVGPIEFAGPCRSKVTLRVTGNIIAPKDPRAWDGLNPRKW 441
           +IAC+S  + +I +P    FLV PI F GPCR+KVT+ ++G IIAPKDP  W GLNP+KW
Sbjct: 75  KIACASITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDVWHGLNPQKW 134

Query: 442 LYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 567
           LYF  V HLT+ G G+I G G +WWS+SCK+N +NPC HAPT
Sbjct: 135 LYFHGVNHLTVRGSGIINGRGHKWWSQSCKINATNPCEHAPT 176


>gb|ABM67700.1| polygalacturonase [Citrus sinensis]
          Length = 445

 Score =  184 bits (467), Expect = 9e-45
 Identities = 81/156 (51%), Positives = 109/156 (69%)
 Frame = +1

Query: 100 ANVSNGDGFDPVIKLPQFQSLXXXXXXXXXXXXHHFGAKGDGIYNDTQAFKDAWEIACSS 279
           A++ + +GFD +++LP   S               FGAKGDG  +DT+AF +AW+ ACS 
Sbjct: 25  ASLVSTEGFDSLLELPHSGSNGTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSF 84

Query: 280 PLRFTIEVPSGSSFLVGPIEFAGPCRSKVTLRVTGNIIAPKDPRAWDGLNPRKWLYFTAV 459
           P R  I   +G +FL+ PI+ +GPC+S++TL+++G I+APKDP  W GLN R+WLYF  V
Sbjct: 85  PARTKIVFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRV 144

Query: 460 KHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 567
            HLT+ GGG I GMG+EWWSRSCK+N +NPCRHAPT
Sbjct: 145 NHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPT 180