BLASTX nr result

ID: Coptis25_contig00030408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030408
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526114.1| receptor-kinase, putative [Ricinus communis]...    86   2e-15
ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002335284.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
emb|CBI23132.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...    84   9e-15

>ref|XP_002526114.1| receptor-kinase, putative [Ricinus communis]
            gi|223534611|gb|EEF36308.1| receptor-kinase, putative
            [Ricinus communis]
          Length = 1033

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 9/93 (9%)
 Frame = -1

Query: 409  FTGKRPTGEMFKDGLCLRDFVMGALPNRVMEIVDPLLL---NEIESRT------EECLVS 257
            FTGKRPT +MFK+GL L  F   ALP+ V EI+DP+LL    EI+SR+       +CL+S
Sbjct: 917  FTGKRPTNDMFKEGLNLHKFAKSALPDGVAEILDPVLLQESGEIDSRSIRTKKIMDCLIS 976

Query: 256  VIRIGLSCCAPLPKDRMAASDAVSKMNAIRNSV 158
            ++ IG+SC A LP DR+  SD   K+++IR+ +
Sbjct: 977  IVDIGVSCSAELPGDRVCTSDVALKLSSIRSKL 1009


>ref|XP_002331306.1| predicted protein [Populus trichocarpa] gi|222873889|gb|EEF11020.1|
            predicted protein [Populus trichocarpa]
          Length = 1021

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 14/100 (14%)
 Frame = -1

Query: 409  FTGKRPTGEMFKDGLCLRDFVMGALPNRVMEIVDPLLLNEI--------------ESRTE 272
            FTGKRPT EMF++G  L +FV  A+P +V +I DP LL E                SR  
Sbjct: 910  FTGKRPTDEMFREGSNLHNFVKRAVPEQVKQITDPTLLQEEPTGDDDKHEISSMRNSRPL 969

Query: 271  ECLVSVIRIGLSCCAPLPKDRMAASDAVSKMNAIRNSVSS 152
            ECL S++RIG+SC    P++RM  SDAV++++++RN + S
Sbjct: 970  ECLNSILRIGISCSVEFPRERMKISDAVAQLHSVRNELQS 1009


>ref|XP_002335284.1| predicted protein [Populus trichocarpa] gi|222833219|gb|EEE71696.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 16/100 (16%)
 Frame = -1

Query: 409 FTGKRPTGEMFKDGLCLRDFVMGALPNRVMEIVDPLLLNEIESRT--------------- 275
           FTGKRPT +MFKD L L  FV  ALP +V+EI DP+L+ E+E +T               
Sbjct: 65  FTGKRPTNDMFKDSLSLSRFVKAALPMQVLEIADPILVQEVEGKTSVNTPHGHRRESGRR 124

Query: 274 -EECLVSVIRIGLSCCAPLPKDRMAASDAVSKMNAIRNSV 158
            +ECL S+  IG++C   +P++R   S+ V+++++IRN +
Sbjct: 125 IQECLASIFTIGVACSEEIPRERKGISNVVTELHSIRNKL 164


>emb|CBI23132.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = -1

Query: 409 FTGKRPTGEMFKDGLCLRDFVMGALPNRVMEIVDPLLLNEIESR--TEECLVSVIRIGLS 236
           FTG+RPT   F+DG  L  FV  +LP RVME++D  LL E + R    EC+++V+RIG++
Sbjct: 585 FTGRRPTDNKFQDGHTLHSFVKTSLPERVMEVIDQPLLLEADERGKMRECIIAVLRIGIT 644

Query: 235 CCAPLPKDRMAASDAVSKMNAIRN 164
           C    PKDRM   DA +K+++I+N
Sbjct: 645 CSMESPKDRMEIGDAANKLHSIKN 668


>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570 [Vitis vinifera]
          Length = 1009

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
 Frame = -1

Query: 409  FTGKRPTGEMFKDGLCLRDFVMGALPNRVMEIVDPLLLNEIESR--TEECLVSVIRIGLS 236
            FTG+RPT   F+DG  L  FV  +LP RVME++D  LL E + R    EC+++V+RIG++
Sbjct: 917  FTGRRPTDNKFQDGHTLHSFVKTSLPERVMEVIDQPLLLEADERGKMRECIIAVLRIGIT 976

Query: 235  CCAPLPKDRMAASDAVSKMNAIRN 164
            C    PKDRM   DA +K+++I+N
Sbjct: 977  CSMESPKDRMEIGDAANKLHSIKN 1000


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