BLASTX nr result

ID: Coptis25_contig00030400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030400
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19524.3| unnamed protein product [Vitis vinifera]              184   1e-44
ref|XP_002282770.1| PREDICTED: protein WEAK CHLOROPLAST MOVEMENT...   184   1e-44
ref|XP_002510222.1| Paramyosin, putative [Ricinus communis] gi|2...   175   5e-42
ref|XP_002326939.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_004165921.1| PREDICTED: protein WEAK CHLOROPLAST MOVEMENT...   165   5e-39

>emb|CBI19524.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  184 bits (466), Expect = 1e-44
 Identities = 107/184 (58%), Positives = 123/184 (66%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   VKKVD-PKEMVDTTAPIESVKEAVTKFGGIIDWKAHKIQAXXXXXXXXXXXXXXXXXXXX 178
           VK+ D  +  VDT AP ESVKEAV+KFGGI+DWKAH+IQ                     
Sbjct: 96  VKQFDVTRAHVDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVERELEKAREDIPE 155

Query: 179 XXXQAEATLDAKAKALDELDSIKRVKEELKLNLXXXXXXXXXXKQDSELANLRVKEMHQG 358
              QAE   DAK +AL ELDS KR+ EELKLNL          KQDSELA LRV+EM QG
Sbjct: 156 YRKQAEDAEDAKTQALKELDSTKRLIEELKLNLERAQTEEHQAKQDSELAKLRVEEMEQG 215

Query: 359 IGDEASAATNAQFEVAQDRHAAAVAELKSVKDELEKLRVEYSSLDLEKEMALKRAEEAVS 538
           I DEAS A  AQ EVA+ RHAAAVA+LK+VKDELE LR EY+SL  EK++A+KRAE+AVS
Sbjct: 216 IADEASVAAKAQLEVAKARHAAAVADLKAVKDELEALRKEYASLVTEKDVAVKRAEQAVS 275

Query: 539 ASIE 550
           AS E
Sbjct: 276 ASKE 279


>ref|XP_002282770.1| PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
           1-like [Vitis vinifera]
          Length = 844

 Score =  184 bits (466), Expect = 1e-44
 Identities = 107/184 (58%), Positives = 123/184 (66%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   VKKVD-PKEMVDTTAPIESVKEAVTKFGGIIDWKAHKIQAXXXXXXXXXXXXXXXXXXXX 178
           VK+ D  +  VDT AP ESVKEAV+KFGGI+DWKAH+IQ                     
Sbjct: 173 VKQFDVTRAHVDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVERELEKAREDIPE 232

Query: 179 XXXQAEATLDAKAKALDELDSIKRVKEELKLNLXXXXXXXXXXKQDSELANLRVKEMHQG 358
              QAE   DAK +AL ELDS KR+ EELKLNL          KQDSELA LRV+EM QG
Sbjct: 233 YRKQAEDAEDAKTQALKELDSTKRLIEELKLNLERAQTEEHQAKQDSELAKLRVEEMEQG 292

Query: 359 IGDEASAATNAQFEVAQDRHAAAVAELKSVKDELEKLRVEYSSLDLEKEMALKRAEEAVS 538
           I DEAS A  AQ EVA+ RHAAAVA+LK+VKDELE LR EY+SL  EK++A+KRAE+AVS
Sbjct: 293 IADEASVAAKAQLEVAKARHAAAVADLKAVKDELEALRKEYASLVTEKDVAVKRAEQAVS 352

Query: 539 ASIE 550
           AS E
Sbjct: 353 ASKE 356


>ref|XP_002510222.1| Paramyosin, putative [Ricinus communis] gi|223550923|gb|EEF52409.1|
           Paramyosin, putative [Ricinus communis]
          Length = 879

 Score =  175 bits (443), Expect = 5e-42
 Identities = 101/183 (55%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
 Frame = +2

Query: 5   KKVD-PKEMVDTTAPIESVKEAVTKFGGIIDWKAHKIQAXXXXXXXXXXXXXXXXXXXXX 181
           K+VD  + ++DTTAP ESVKEAV+KFGGI+DWKAHKIQ                      
Sbjct: 220 KQVDVSRGLIDTTAPFESVKEAVSKFGGIVDWKAHKIQTVERRKLVEHELEKVQEEMPEY 279

Query: 182 XXQAEATLDAKAKALDELDSIKRVKEELKLNLXXXXXXXXXXKQDSELANLRVKEMHQGI 361
             Q+E    AK + L ELDS KR+ EELKLNL          KQDSELA LRV+E+ QGI
Sbjct: 280 RRQSEDAEHAKVQILKELDSTKRLIEELKLNLERAQTEEHQAKQDSELARLRVEELEQGI 339

Query: 362 GDEASAATNAQFEVAQDRHAAAVAELKSVKDELEKLRVEYSSLDLEKEMALKRAEEAVSA 541
            DEAS A  AQ EVA+ RH AA++ELKSV DEL+ LR EY+SL  EK+ A K+AEEAVSA
Sbjct: 340 ADEASVAAKAQLEVAKARHTAAISELKSVSDELQTLRKEYASLIAEKDEASKKAEEAVSA 399

Query: 542 SIE 550
           S E
Sbjct: 400 SRE 402


>ref|XP_002326939.1| predicted protein [Populus trichocarpa] gi|222835254|gb|EEE73689.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  167 bits (423), Expect = 1e-39
 Identities = 96/184 (52%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
 Frame = +2

Query: 2   VKKVD-PKEMVDTTAPIESVKEAVTKFGGIIDWKAHKIQAXXXXXXXXXXXXXXXXXXXX 178
           VK+ D  + ++DT AP ESVKEAV+KFGGI+DWKAH+IQ                     
Sbjct: 44  VKQADINRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVDQELETVQVEMPE 103

Query: 179 XXXQAEATLDAKAKALDELDSIKRVKEELKLNLXXXXXXXXXXKQDSELANLRVKEMHQG 358
              ++EA  + K + L ELD+ KR+ EELKLNL          KQDSEL  LRV+EM QG
Sbjct: 104 YKKRSEAAEEEKTQVLKELDNTKRLIEELKLNLERAQTEEHQAKQDSELVKLRVEEMEQG 163

Query: 359 IGDEASAATNAQFEVAQDRHAAAVAELKSVKDELEKLRVEYSSLDLEKEMALKRAEEAVS 538
           I DEAS A  AQ EVA+ RH+AAV+ELK+V DELE L  EY+SL  EK+ A+K+AE AVS
Sbjct: 164 IADEASVAAKAQLEVAKARHSAAVSELKAVNDELEALHKEYTSLVSEKDEAVKKAEVAVS 223

Query: 539 ASIE 550
           AS E
Sbjct: 224 ASKE 227


>ref|XP_004165921.1| PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
           1-like [Cucumis sativus]
          Length = 768

 Score =  165 bits (417), Expect = 5e-39
 Identities = 91/175 (52%), Positives = 114/175 (65%)
 Frame = +2

Query: 26  MVDTTAPIESVKEAVTKFGGIIDWKAHKIQAXXXXXXXXXXXXXXXXXXXXXXXQAEATL 205
           ++DTTAP ESVKEAV+KFGGI+DWKAH+IQ                        Q+E   
Sbjct: 107 LIDTTAPFESVKEAVSKFGGIVDWKAHRIQTVERRKLVEQELEKLQEEIPEYRRQSETAE 166

Query: 206 DAKAKALDELDSIKRVKEELKLNLXXXXXXXXXXKQDSELANLRVKEMHQGIGDEASAAT 385
           D K K L ELDS KR+ EELKLNL          +QDSELA LRV+EM QGI +EAS A 
Sbjct: 167 DEKKKVLKELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIAEEASVAA 226

Query: 386 NAQFEVAQDRHAAAVAELKSVKDELEKLRVEYSSLDLEKEMALKRAEEAVSASIE 550
            AQ EVA+ RH AAV+EL+SVK+ELE L  E++SL +++  A+ +AE+AV+AS E
Sbjct: 227 KAQLEVAKARHVAAVSELQSVKEELELLCKEFASLVIDRNAAIAKAEDAVAASKE 281


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