BLASTX nr result
ID: Coptis25_contig00030391
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030391 (808 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273698.2| PREDICTED: charged multivesicular body prote... 229 5e-58 emb|CBI37046.3| unnamed protein product [Vitis vinifera] 229 5e-58 ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2... 224 1e-56 ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] g... 221 2e-55 ref|XP_004151427.1| PREDICTED: charged multivesicular body prote... 203 3e-50 >ref|XP_002273698.2| PREDICTED: charged multivesicular body protein 7 [Vitis vinifera] Length = 478 Score = 229 bits (584), Expect = 5e-58 Identities = 118/208 (56%), Positives = 151/208 (72%), Gaps = 3/208 (1%) Frame = +1 Query: 193 LSMSSVAEYIRHQVADWDDEVVTSGRFKAFSGQRSDWEPKYLFWKDLILKVARHLGVFTI 372 + +V E+IR +V DW++E + + RFKAFSGQRSDWE +Y FW+DLILKVARH + I Sbjct: 41 MESEAVREFIRREVKDWEEEAIATARFKAFSGQRSDWEARYQFWRDLILKVARHFHLLFI 100 Query: 373 HSSQV-KDWFIRGGLTPLCIDRVLLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGI 543 SSQV KDWF RGGLTPLC+D VL MYN G+ +RS + D TSGRLSQLF++V H + Sbjct: 101 SSSQVKKDWFNRGGLTPLCLDHVLFLMYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVR 160 Query: 544 STSSSAPQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASAI 723 STS+ ED IL LL ++ EV++ LSES WTS C+IT++KF IC + +ASA+ Sbjct: 161 STSAEVMFEDHLILLPLLKDKTVEVVKVLSESQWTSSCVITMKKFQDIC--GGTREASAV 218 Query: 724 LTYLSSNGKARLLSISKMDFIQGVKVSL 807 L+YLS GKA+ LSISK + I+GVKVSL Sbjct: 219 LSYLSGCGKAQYLSISKKELIEGVKVSL 246 >emb|CBI37046.3| unnamed protein product [Vitis vinifera] Length = 438 Score = 229 bits (584), Expect = 5e-58 Identities = 118/208 (56%), Positives = 151/208 (72%), Gaps = 3/208 (1%) Frame = +1 Query: 193 LSMSSVAEYIRHQVADWDDEVVTSGRFKAFSGQRSDWEPKYLFWKDLILKVARHLGVFTI 372 + +V E+IR +V DW++E + + RFKAFSGQRSDWE +Y FW+DLILKVARH + I Sbjct: 1 MESEAVREFIRREVKDWEEEAIATARFKAFSGQRSDWEARYQFWRDLILKVARHFHLLFI 60 Query: 373 HSSQV-KDWFIRGGLTPLCIDRVLLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGI 543 SSQV KDWF RGGLTPLC+D VL MYN G+ +RS + D TSGRLSQLF++V H + Sbjct: 61 SSSQVKKDWFNRGGLTPLCLDHVLFLMYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVR 120 Query: 544 STSSSAPQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASAI 723 STS+ ED IL LL ++ EV++ LSES WTS C+IT++KF IC + +ASA+ Sbjct: 121 STSAEVMFEDHLILLPLLKDKTVEVVKVLSESQWTSSCVITMKKFQDIC--GGTREASAV 178 Query: 724 LTYLSSNGKARLLSISKMDFIQGVKVSL 807 L+YLS GKA+ LSISK + I+GVKVSL Sbjct: 179 LSYLSGCGKAQYLSISKKELIEGVKVSL 206 >ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1| predicted protein [Populus trichocarpa] Length = 436 Score = 224 bits (572), Expect = 1e-56 Identities = 118/209 (56%), Positives = 153/209 (73%), Gaps = 5/209 (2%) Frame = +1 Query: 196 SMSSVAEYIRHQVADWDDEVVTSGRFKAFSGQRSDWEPKYLFWKDLILKVARHLGVFTIH 375 S+SSV E+IR QV DWDDE++ + RFKAFSGQRSDWEPKYLFWKDLILK+ARHL +F I Sbjct: 3 SVSSVKEFIRKQVPDWDDEIMATARFKAFSGQRSDWEPKYLFWKDLILKIARHLDLFIIQ 62 Query: 376 SSQVKD-WFIRGGLTPLCIDRVLLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGIS 546 SQVK+ WF RGGLTPLC+D VL MYN G+ +R+ + D +SGR+SQLF++V + + S Sbjct: 63 PSQVKEKWFNRGGLTPLCLDHVLCLMYNEGDIVRNVDLVDPSSGRISQLFRKVRNLMVRS 122 Query: 547 --TSSSAPQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASA 720 T ED L LL ++ ++I+CLSESHWTS CIIT+ KF +C ++A+ Sbjct: 123 PVTPEIIMLEDHLFLTPLLKDKTAQIIKCLSESHWTSSCIITMSKFQGMC--GGPSEAAP 180 Query: 721 ILTYLSSNGKARLLSISKMDFIQGVKVSL 807 +L+YLS GKA+ SISK + I+GVK+SL Sbjct: 181 LLSYLSGLGKAQYFSISK-EVIEGVKISL 208 >ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] gi|223545649|gb|EEF47153.1| Protein CHMP7, putative [Ricinus communis] Length = 438 Score = 221 bits (562), Expect = 2e-55 Identities = 109/209 (52%), Positives = 152/209 (72%), Gaps = 4/209 (1%) Frame = +1 Query: 193 LSMSSVAEYIRHQVADWDDEVVTSGRFKAFSGQRSDWEPKYLFWKDLILKVARHLGVFTI 372 + S V E+I +V+DW++EV+ + RFKAFSGQRSDWEPKY FW++LILK+ARHLG+FTI Sbjct: 1 MDSSMVMEFICKEVSDWNEEVIATARFKAFSGQRSDWEPKYQFWRNLILKIARHLGLFTI 60 Query: 373 HSSQVK-DWFIRGGLTPLCIDRVLLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGI 543 QVK +WF RGGLTPLC+D VL MY G+ +R+ + D TSGR SQL+++V + + Sbjct: 61 RPCQVKNEWFNRGGLTPLCLDHVLFLMYTEGDIIRNVDVVDATSGRFSQLYRKVTNLVIR 120 Query: 544 STSS-SAPQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASA 720 ST++ ED IL LL E+A +VI+ LSE+HWT+ C++T+ KF +C N+AS Sbjct: 121 STTTPDLLLEDNLILTPLLKEKADQVIKLLSENHWTTSCVVTMRKFQDMC--GGPNEASV 178 Query: 721 ILTYLSSNGKARLLSISKMDFIQGVKVSL 807 +L+Y S GKA+ LS+ K +F++G+KVSL Sbjct: 179 VLSYFSGVGKAQYLSVCKKEFVEGIKVSL 207 >ref|XP_004151427.1| PREDICTED: charged multivesicular body protein 7-like [Cucumis sativus] Length = 440 Score = 203 bits (517), Expect = 3e-50 Identities = 107/207 (51%), Positives = 142/207 (68%), Gaps = 5/207 (2%) Frame = +1 Query: 202 SSVAEYIRHQVADWDDEVVTSGRFKAFSGQRSDWEPKYLFWKDLILKVARHLGVFTIHSS 381 S V E+IR +V DWDDEVV + RFKAFSGQ+SDWEP+YLFW+DLIL VAR I S Sbjct: 8 SCVREFIREKVPDWDDEVVATARFKAFSGQKSDWEPRYLFWRDLILTVARQFNFLIIKPS 67 Query: 382 QVKD-WFIRGGLTPLCIDRVLLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGISTS 552 ++K+ WF RGGLTPLC+D VL MY G+ +R + D SG+LS +FK++ + +G S Sbjct: 68 EIKNQWFYRGGLTPLCLDHVLHLMYTGGDIIRRSDMLDPRSGQLSYMFKKLSNLMGTSKK 127 Query: 553 S--SAPQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASAIL 726 + S ++D +L +L +RA EVI+CLS S WTS CIIT+ KF IC ++A+ IL Sbjct: 128 NPDSLLRDDYIVLACVLQDRAAEVIKCLSLSSWTSSCIITMVKFQNIC--GGPDEATVIL 185 Query: 727 TYLSSNGKARLLSISKMDFIQGVKVSL 807 +YL GKA+ LS K + ++GVKVSL Sbjct: 186 SYLIECGKAKFLSKEKKELLEGVKVSL 212