BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030389
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35084.1| unknown [Lotus japonicus]                               95   5e-18
gb|AFK35078.1| unknown [Lotus japonicus]                               95   5e-18
ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula] g...    85   7e-15
ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycin...    82   3e-14
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...    82   5e-14

>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/111 (42%), Positives = 70/111 (63%)
 Frame = +1

Query: 16  MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLSLDFPHFQN 195
           M  LPEE+W RILE G+E    T+KD+C  SISC+ F++LS+D+SLW+ LLS DFP    
Sbjct: 13  MSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSLTP 72

Query: 196 EDTSSSEESQKNLYKSRLEIYRQLERDFIRRTVFNQEYRLGVLGRKIKRVR 348
             +SS+  S K+LYK R E  ++      +R V  +E ++    RK++ ++
Sbjct: 73  PSSSSTSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123


>gb|AFK35078.1| unknown [Lotus japonicus]
          Length = 257

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/111 (42%), Positives = 70/111 (63%)
 Frame = +1

Query: 16  MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLSLDFPHFQN 195
           M  LPEE+W RILE G+E    T+KD+C  SISC+ F++LS+D+SLW+ LLS DFP    
Sbjct: 13  MSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPSLTP 72

Query: 196 EDTSSSEESQKNLYKSRLEIYRQLERDFIRRTVFNQEYRLGVLGRKIKRVR 348
             +SS+  S K+LYK R E  ++      +R V  +E ++    RK++ ++
Sbjct: 73  PSSSSTSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123


>ref|XP_003624761.1| F-box protein SKIP24 [Medicago truncatula]
           gi|357508969|ref|XP_003624773.1| F-box protein SKIP24
           [Medicago truncatula] gi|355499776|gb|AES80979.1| F-box
           protein SKIP24 [Medicago truncatula]
           gi|355499788|gb|AES80991.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 135

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = +1

Query: 16  MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLSLDFPHFQN 195
           M  LPEE+W RILE GIEK  L++KD+C  SISC   ++LS+D+SLW+ L+S DFP   +
Sbjct: 1   MSSLPEELWSRILEIGIEKSSLSYKDLCCISISCHLLHRLSSDDSLWNGLISSDFP---S 57

Query: 196 EDTSSSEESQKNLYKSRLEIYRQLER 273
              SS   S K+LYK RLE  R+ ER
Sbjct: 58  SSASSLASSSKSLYKLRLE--REKER 81


>ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycine max]
          Length = 267

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
 Frame = +1

Query: 22  VLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLSLDFPHFQNE- 198
           +LP+E+W RILE GIE    ++KD+C  SISC+  ++LS++  LW+ LL  D+P  Q+  
Sbjct: 5   LLPDELWRRILEIGIESNGFSYKDLCCVSISCRRLHRLSSEEPLWNRLLFSDYPQSQSHP 64

Query: 199 DTSSSEESQKNLYKSRLEIYRQLERDFIRRTVFNQEYRLGVLGRKIKRVRREL 357
            +SSS  S K+LY+ R E  ++      RR V  +E ++    R++K ++  L
Sbjct: 65  SSSSSSSSSKSLYRLRFERDKERRIAAHRRAVLRKESQVAEHSRRLKDMKTRL 117


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/111 (40%), Positives = 69/111 (62%)
 Frame = +1

Query: 16  MEVLPEEIWIRILETGIEKWILTHKDICSFSISCKNFNKLSNDNSLWSTLLSLDFPHFQN 195
           M  LP E+W +ILE GI+   L++KD+C  SISC+  ++LS ++SLW+ LLS DFP   +
Sbjct: 1   MSSLPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFP---S 57

Query: 196 EDTSSSEESQKNLYKSRLEIYRQLERDFIRRTVFNQEYRLGVLGRKIKRVR 348
             TSSS  S K+LYK R E  ++ +    RR V  +E ++    R++  ++
Sbjct: 58  SSTSSSSSSSKSLYKLRFERDKERKIAAHRRVVLRKESQILEHSRRLHDIQ 108