BLASTX nr result

ID: Coptis25_contig00030367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030367
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534404.1| conserved hypothetical protein [Ricinus comm...    58   4e-06

>ref|XP_002534404.1| conserved hypothetical protein [Ricinus communis]
           gi|223525361|gb|EEF27982.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -3

Query: 882 RICKPWTNCLNGKIFGRKVSVKHL--M*KME*KTLFSIILLLLDNDYFILKLSMKDDLDY 709
           R+ K W   L  K+ GR +   +L  + K   K   SI L+ LDND++I KLS K+D D+
Sbjct: 71  RMRKSWKQTLIIKLLGRSIGHNYLFRIVKELWKAKGSIDLVALDNDFYIAKLSFKNDYDF 130

Query: 708 VLTEGPWFIADYY 670
            L EGPW + D+Y
Sbjct: 131 ALFEGPWMVVDHY 143


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