BLASTX nr result

ID: Coptis25_contig00030361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030361
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    82   4e-14
ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...    82   4e-14
gb|ACN40446.1| unknown [Picea sitchensis]                              82   6e-14
ref|NP_001030635.1| ankyrin repeat family protein [Arabidopsis t...    79   3e-13
ref|NP_187122.1| ankyrin repeat family protein [Arabidopsis thal...    79   3e-13

>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/84 (52%), Positives = 54/84 (64%)
 Frame = -3

Query: 252 RTRRLLGAAIAGNLRDLKKAVAELGDYQGKELGKRVVKVKDDNGINALHFAAEEGKFFIC 73
           + ++ L AA  GNL   KK  A+L D  GK L   V  VKD N   ALHFAA EG+  +C
Sbjct: 14  KVQQFLNAACTGNLDLFKKLAAQLDD--GKGLAGTVADVKDANKRGALHFAAREGRTEVC 71

Query: 72  KYLIDELEIDVDIKDPKGATPLLH 1
           KYL++EL++DVD KD  G TPLLH
Sbjct: 72  KYLLEELKLDVDAKDEDGETPLLH 95


>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 463

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/85 (49%), Positives = 55/85 (64%)
 Frame = -3

Query: 255 ERTRRLLGAAIAGNLRDLKKAVAELGDYQGKELGKRVVKVKDDNGINALHFAAEEGKFFI 76
           ++ +  L AA  GNL  LK   A+L D  GK + K V  +KD N   ALHFAA EGK  +
Sbjct: 13  QKVQNFLTAACTGNLDLLKNIAAQLDD--GKGMAKTVADIKDANKRGALHFAAREGKTEV 70

Query: 75  CKYLIDELEIDVDIKDPKGATPLLH 1
           CKYL+++L++DVD KD  G TPL+H
Sbjct: 71  CKYLLEDLKLDVDTKDDDGETPLIH 95


>gb|ACN40446.1| unknown [Picea sitchensis]
          Length = 460

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/85 (48%), Positives = 56/85 (65%)
 Frame = -3

Query: 255 ERTRRLLGAAIAGNLRDLKKAVAELGDYQGKELGKRVVKVKDDNGINALHFAAEEGKFFI 76
           ++   LL AA  GNL  LKKA   +GD  G++L + +  VKD NG  ALHFAA +G+  I
Sbjct: 18  DKVNTLLNAARDGNLERLKKAAQAIGD--GQDLAETIAAVKDANGRGALHFAARDGRTEI 75

Query: 75  CKYLIDELEIDVDIKDPKGATPLLH 1
           CKYL+++L + VD +D  G TPL+H
Sbjct: 76  CKYLLEDLNLCVDSRDDDGETPLIH 100


>ref|NP_001030635.1| ankyrin repeat family protein [Arabidopsis thaliana]
           gi|332640602|gb|AEE74123.1| ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 455

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = -3

Query: 255 ERTRRLLGAAIAGNLRDLKKAVAELGDYQGKELGKRVVKVKDDNGINALHFAAEEGKFFI 76
           E+ +++L AA  GNL  LK    +L +  GK+L K V  +KD N   ALHFAA EG+  I
Sbjct: 13  EKVQQILNAACTGNLEFLKNVAKQLDE--GKDLTKTVESIKDANKRGALHFAAREGQTEI 70

Query: 75  CKYLIDELEIDVDIKDPKGATPLLH 1
           C+YL++EL+++ D KD  G TPL+H
Sbjct: 71  CRYLLEELKLNADAKDETGDTPLVH 95


>ref|NP_187122.1| ankyrin repeat family protein [Arabidopsis thaliana]
           gi|6175185|gb|AAF04911.1|AC011437_26 ankyrin-like
           protein [Arabidopsis thaliana]
           gi|21536583|gb|AAM60915.1| ankyrin-like protein
           [Arabidopsis thaliana] gi|22531046|gb|AAM97027.1|
           ankyrin-like protein [Arabidopsis thaliana]
           gi|23197986|gb|AAN15520.1| ankyrin-like protein
           [Arabidopsis thaliana] gi|51969096|dbj|BAD43240.1|
           ankyrin-like protein [Arabidopsis thaliana]
           gi|332640601|gb|AEE74122.1| ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 456

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = -3

Query: 255 ERTRRLLGAAIAGNLRDLKKAVAELGDYQGKELGKRVVKVKDDNGINALHFAAEEGKFFI 76
           E+ +++L AA  GNL  LK    +L +  GK+L K V  +KD N   ALHFAA EG+  I
Sbjct: 13  EKVQQILNAACTGNLEFLKNVAKQLDE--GKDLTKTVESIKDANKRGALHFAAREGQTEI 70

Query: 75  CKYLIDELEIDVDIKDPKGATPLLH 1
           C+YL++EL+++ D KD  G TPL+H
Sbjct: 71  CRYLLEELKLNADAKDETGDTPLVH 95


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