BLASTX nr result
ID: Coptis25_contig00030337
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030337 (501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|2... 70 1e-10 ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254... 70 1e-10 ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216... 61 1e-07 ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804... 56 3e-06 >ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|222854189|gb|EEE91736.1| predicted protein [Populus trichocarpa] Length = 129 Score = 76.6 bits (187), Expect = 2e-12 Identities = 50/114 (43%), Positives = 61/114 (53%) Frame = +3 Query: 3 KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182 K SKRVSF+PD+NDK +F KH GS L+FRLP+TS+ S + L S Sbjct: 4 KASKRVSFSPDVNDKPTIFLKH--GSGTRVGGNRKKIAGTLTFRLPRTSKFSPA-RLLRS 60 Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344 LS KVAR L ++ RSRS VDS EA+EDCIEF+N Sbjct: 61 LSAKVARVL-RFVSMRKESSHNVTSSSLPRSRSLAEAVDSQRAEAMEDCIEFLN 113 >ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|222867597|gb|EEF04728.1| predicted protein [Populus trichocarpa] Length = 129 Score = 70.5 bits (171), Expect = 1e-10 Identities = 48/114 (42%), Positives = 57/114 (50%) Frame = +3 Query: 3 KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182 K SKR+SF+PD NDK +F KH GS SFRLP+TS+ S + L Sbjct: 4 KASKRLSFSPDENDKPTIFLKH--GSGTRVGGSRKKIAGIFSFRLPRTSKFSPA-RLLRR 60 Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344 L KVAR L ++ RSRS VDS EAIEDCIEF+N Sbjct: 61 LGAKVARVLRFVPMGRKSSRKVTSS-SLPRSRSLAEAVDSQRAEAIEDCIEFLN 113 >ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254499 [Vitis vinifera] gi|147783058|emb|CAN62121.1| hypothetical protein VITISV_037026 [Vitis vinifera] Length = 129 Score = 70.5 bits (171), Expect = 1e-10 Identities = 46/112 (41%), Positives = 56/112 (50%) Frame = +3 Query: 9 SKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDSLS 188 SKRVSF+PD+NDK M KH G SFRLP++S S +FL L Sbjct: 6 SKRVSFSPDVNDKPTMLLKH--GGCSRASGHRRRVAVIWSFRLPRSSSFSPA-RFLRRLG 62 Query: 189 TKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344 +V RAL ++ RSRS +DSH EAIEDCIEF+N Sbjct: 63 DRVVRALRFMSMRRRSSRRVSSS-SLTRSRSLVDPIDSHRAEAIEDCIEFLN 113 >ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216064 [Cucumis sativus] gi|449483470|ref|XP_004156601.1| PREDICTED: uncharacterized LOC101216064 [Cucumis sativus] Length = 123 Score = 60.8 bits (146), Expect = 1e-07 Identities = 41/114 (35%), Positives = 55/114 (48%) Frame = +3 Query: 3 KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182 K SKRVSF+PD+NDK + KH G SF L + +R + +FL S Sbjct: 4 KASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMW--------SFGLSRETRYLPV-RFLQS 54 Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344 L +V+ A+ RSRS + ++SH EAIEDCIEF+N Sbjct: 55 LKNRVSEAIRFVSTRKSSRKVSSAS-TFTRSRSVSDSMESHRAEAIEDCIEFLN 107 >ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804764 [Glycine max] Length = 127 Score = 56.2 bits (134), Expect = 3e-06 Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 4/118 (3%) Frame = +3 Query: 3 KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLS----FRLPKTSRLSAMNK 170 + SKRV F+PD+NDK +F K+ G ++ FR + LS K Sbjct: 3 RKSKRVCFSPDVNDKPTLFLKYNGGGGNDKDNRVSRNGKRVTRPCTFRFSMDTNLSPA-K 61 Query: 171 FLDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344 FL L KVA A+ + RSRS + DSH E +EDCIEF++ Sbjct: 62 FLLQLGEKVASAIRNVSVRRRSSRKVSSS-TLVRSRSLSDLTDSHRAETVEDCIEFLH 118