BLASTX nr result

ID: Coptis25_contig00030337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030337
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254...    70   1e-10
ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216...    61   1e-07
ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804...    56   3e-06

>ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|222854189|gb|EEE91736.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/114 (43%), Positives = 61/114 (53%)
 Frame = +3

Query: 3   KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182
           K SKRVSF+PD+NDK  +F KH  GS              L+FRLP+TS+ S   + L S
Sbjct: 4   KASKRVSFSPDVNDKPTIFLKH--GSGTRVGGNRKKIAGTLTFRLPRTSKFSPA-RLLRS 60

Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344
           LS KVAR L                 ++ RSRS    VDS   EA+EDCIEF+N
Sbjct: 61  LSAKVARVL-RFVSMRKESSHNVTSSSLPRSRSLAEAVDSQRAEAMEDCIEFLN 113


>ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|222867597|gb|EEF04728.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/114 (42%), Positives = 57/114 (50%)
 Frame = +3

Query: 3   KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182
           K SKR+SF+PD NDK  +F KH  GS               SFRLP+TS+ S   + L  
Sbjct: 4   KASKRLSFSPDENDKPTIFLKH--GSGTRVGGSRKKIAGIFSFRLPRTSKFSPA-RLLRR 60

Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344
           L  KVAR L                 ++ RSRS    VDS   EAIEDCIEF+N
Sbjct: 61  LGAKVARVLRFVPMGRKSSRKVTSS-SLPRSRSLAEAVDSQRAEAIEDCIEFLN 113


>ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254499 [Vitis vinifera]
           gi|147783058|emb|CAN62121.1| hypothetical protein
           VITISV_037026 [Vitis vinifera]
          Length = 129

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/112 (41%), Positives = 56/112 (50%)
 Frame = +3

Query: 9   SKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDSLS 188
           SKRVSF+PD+NDK  M  KH  G                SFRLP++S  S   +FL  L 
Sbjct: 6   SKRVSFSPDVNDKPTMLLKH--GGCSRASGHRRRVAVIWSFRLPRSSSFSPA-RFLRRLG 62

Query: 189 TKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344
            +V RAL                 ++ RSRS    +DSH  EAIEDCIEF+N
Sbjct: 63  DRVVRALRFMSMRRRSSRRVSSS-SLTRSRSLVDPIDSHRAEAIEDCIEFLN 113


>ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216064 [Cucumis sativus]
           gi|449483470|ref|XP_004156601.1| PREDICTED:
           uncharacterized LOC101216064 [Cucumis sativus]
          Length = 123

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/114 (35%), Positives = 55/114 (48%)
 Frame = +3

Query: 3   KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKFLDS 182
           K SKRVSF+PD+NDK  +  KH  G                SF L + +R   + +FL S
Sbjct: 4   KASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMW--------SFGLSRETRYLPV-RFLQS 54

Query: 183 LSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344
           L  +V+ A+                    RSRS +  ++SH  EAIEDCIEF+N
Sbjct: 55  LKNRVSEAIRFVSTRKSSRKVSSAS-TFTRSRSVSDSMESHRAEAIEDCIEFLN 107


>ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804764 [Glycine max]
          Length = 127

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   KNSKRVSFNPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLS----FRLPKTSRLSAMNK 170
           + SKRV F+PD+NDK  +F K+  G               ++    FR    + LS   K
Sbjct: 3   RKSKRVCFSPDVNDKPTLFLKYNGGGGNDKDNRVSRNGKRVTRPCTFRFSMDTNLSPA-K 61

Query: 171 FLDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 344
           FL  L  KVA A+                  + RSRS +   DSH  E +EDCIEF++
Sbjct: 62  FLLQLGEKVASAIRNVSVRRRSSRKVSSS-TLVRSRSLSDLTDSHRAETVEDCIEFLH 118


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