BLASTX nr result

ID: Coptis25_contig00030334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030334
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521198.1| PREDICTED: uncharacterized protein LOC100816...    64   1e-08
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...    64   2e-08
ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis l...    64   2e-08
ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1...    62   4e-08
ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003521198.1| PREDICTED: uncharacterized protein LOC100816760 [Glycine max]
          Length = 215

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/42 (69%), Positives = 40/42 (95%)
 Frame = -2

Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225
           KLL++I+QVE+ VREE+K++KRTP+AK+A+RE +VRTLMSMR
Sbjct: 174 KLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 215


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -2

Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225
           KLL+SI++VEKVV EEI++MK TP+AKRA+RE +VRTLMSMR
Sbjct: 218 KLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259


>ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297327668|gb|EFH58088.1| polychome, UV-B-insensitive
           4 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -2

Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225
           KLL+SI++VEKVV EEI++MK TP+AKRA+RE +VRTLMSMR
Sbjct: 217 KLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 258


>ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1|
           unknown [Populus trichocarpa]
           gi|222872923|gb|EEF10054.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -2

Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225
           KLL+SI+ VEKVV EE+++MKRTP+A++A+RE +VRTLMSMR
Sbjct: 207 KLLNSIDTVEKVVMEELRKMKRTPSARKAEREKRVRTLMSMR 248


>ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|222867927|gb|EEF05058.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -2

Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225
           KLL+SI+ VEKVV EE++++KRTP+AK+A+RE +VRTLMSMR
Sbjct: 206 KLLNSIDTVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSMR 247


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