BLASTX nr result
ID: Coptis25_contig00030334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00030334 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521198.1| PREDICTED: uncharacterized protein LOC100816... 64 1e-08 ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26... 64 2e-08 ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis l... 64 2e-08 ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1... 62 4e-08 ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 >ref|XP_003521198.1| PREDICTED: uncharacterized protein LOC100816760 [Glycine max] Length = 215 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/42 (69%), Positives = 40/42 (95%) Frame = -2 Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225 KLL++I+QVE+ VREE+K++KRTP+AK+A+RE +VRTLMSMR Sbjct: 174 KLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 215 >ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1| hypothetical protein [Arabidopsis thaliana] gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis thaliana] gi|110735686|dbj|BAE99823.1| hypothetical protein [Arabidopsis thaliana] gi|330255003|gb|AEC10097.1| uv-b-insensitive 4 [Arabidopsis thaliana] Length = 259 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/42 (73%), Positives = 39/42 (92%) Frame = -2 Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225 KLL+SI++VEKVV EEI++MK TP+AKRA+RE +VRTLMSMR Sbjct: 218 KLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259 >ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis lyrata subsp. lyrata] gi|297327668|gb|EFH58088.1| polychome, UV-B-insensitive 4 [Arabidopsis lyrata subsp. lyrata] Length = 258 Score = 63.5 bits (153), Expect = 2e-08 Identities = 31/42 (73%), Positives = 39/42 (92%) Frame = -2 Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225 KLL+SI++VEKVV EEI++MK TP+AKRA+RE +VRTLMSMR Sbjct: 217 KLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 258 >ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1| unknown [Populus trichocarpa] gi|222872923|gb|EEF10054.1| predicted protein [Populus trichocarpa] Length = 248 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/42 (69%), Positives = 39/42 (92%) Frame = -2 Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225 KLL+SI+ VEKVV EE+++MKRTP+A++A+RE +VRTLMSMR Sbjct: 207 KLLNSIDTVEKVVMEELRKMKRTPSARKAEREKRVRTLMSMR 248 >ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|222867927|gb|EEF05058.1| predicted protein [Populus trichocarpa] Length = 247 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/42 (69%), Positives = 39/42 (92%) Frame = -2 Query: 350 KLLSSIEQVEKVVREEIKRMKRTPTAKRADREMKVRTLMSMR 225 KLL+SI+ VEKVV EE++++KRTP+AK+A+RE +VRTLMSMR Sbjct: 206 KLLNSIDTVEKVVMEELQKLKRTPSAKKAEREKRVRTLMSMR 247