BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030331
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   231   5e-59
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   230   8e-59
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   215   3e-54
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...   213   1e-53
ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protei...   212   2e-53

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score =  231 bits (589), Expect = 5e-59
 Identities = 118/152 (77%), Positives = 131/152 (86%)
 Frame = -1

Query: 456 LLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSSMESRASIMKV 277
           LL+AGATV+AIEKD HMAALV+ERFA  +R  VLQEDF KC+I  H+ S +ES+ +  K 
Sbjct: 107 LLDAGATVLAIEKDAHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLFSLLESKKAKNKE 166

Query: 276 PRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLIDASLRTSEYRPINIF 97
            R+AKVVSN+PFNISTDVVK LLPMGDIFSEVVLLLQDETA RL++ASLRT EYRPINIF
Sbjct: 167 SRYAKVVSNIPFNISTDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPINIF 226

Query: 96  VNFYSDPEYKLKVLRTNFFPQPNVDAAVVAFK 1
           VNFYSDPEYK KV RTNFFPQPNVDAAVV FK
Sbjct: 227 VNFYSDPEYKFKVPRTNFFPQPNVDAAVVVFK 258


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/152 (73%), Positives = 133/152 (87%)
 Frame = -1

Query: 456 LLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSSMESRASIMKV 277
           LL+ GATV+AIEKD HMAA+V+ERF+  +RF +LQEDF KC+IR HM+S +E+  S+ + 
Sbjct: 110 LLDTGATVLAIEKDAHMAAIVRERFSHTDRFKLLQEDFVKCHIRFHMLSLLENMTSLNEK 169

Query: 276 PRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLIDASLRTSEYRPINIF 97
           PR AKVV+N+PFNISTDVVKQLLPMGDI SEV LLLQ+ETASRL+++SLRTSEYRPIN+F
Sbjct: 170 PRRAKVVANIPFNISTDVVKQLLPMGDIISEVALLLQEETASRLVESSLRTSEYRPINVF 229

Query: 96  VNFYSDPEYKLKVLRTNFFPQPNVDAAVVAFK 1
           VNFYSDP YK KV R+NFFPQPNVDAAVV FK
Sbjct: 230 VNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFK 261


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Cucumis sativus]
          Length = 347

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/152 (70%), Positives = 125/152 (82%)
 Frame = -1

Query: 456 LLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSSMESRASIMKV 277
           L+N+GATV+A+EKD +MA LV ERFA+  R  VL EDF KCN+  HMMS ++S       
Sbjct: 119 LINSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEAR 178

Query: 276 PRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLIDASLRTSEYRPINIF 97
            + AKVVSN+PFNISTD++KQLLPMGDIFSEVVLLLQ+E A RL++ SLRTSEYRPIN+F
Sbjct: 179 SQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVF 238

Query: 96  VNFYSDPEYKLKVLRTNFFPQPNVDAAVVAFK 1
           VNFYSDPE K KV RTNFFPQPNVDAAVV+FK
Sbjct: 239 VNFYSDPELKFKVPRTNFFPQPNVDAAVVSFK 270


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
           lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
           ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  213 bits (543), Expect = 1e-53
 Identities = 108/152 (71%), Positives = 122/152 (80%)
 Frame = -1

Query: 456 LLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSSMESRASIMKV 277
           L+N GATV+AIEKDPHM  LV ERFA  ++F VLQEDF KC+IR HM+S +ESR      
Sbjct: 114 LINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILESRRLSHPD 173

Query: 276 PRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLIDASLRTSEYRPINIF 97
              AKVVSNLPFNISTDVVK LLPMGDIFS+VVLLLQDE A RL++ +LRTSEYRPINI 
Sbjct: 174 SSLAKVVSNLPFNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINIL 233

Query: 96  VNFYSDPEYKLKVLRTNFFPQPNVDAAVVAFK 1
           +NFYS+PEY  +V R NFFPQP VDAAVV FK
Sbjct: 234 INFYSEPEYNFRVPRENFFPQPKVDAAVVTFK 265


>ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana] gi|3005590|gb|AAC09322.1| dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|26449914|dbj|BAC42078.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|28827572|gb|AAO50630.1| putative dimethyladenosine
           transferase [Arabidopsis thaliana]
           gi|332189223|gb|AEE27344.1| Ribosomal RNA adenine
           dimethylase family protein [Arabidopsis thaliana]
          Length = 343

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/152 (70%), Positives = 122/152 (80%)
 Frame = -1

Query: 456 LLNAGATVIAIEKDPHMAALVKERFASFERFSVLQEDFTKCNIRCHMMSSMESRASIMKV 277
           L+N GATV+AIEKDPHM  LV ERFA  ++F VLQEDF KC+IR HM+S +E+R      
Sbjct: 115 LINLGATVLAIEKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPD 174

Query: 276 PRHAKVVSNLPFNISTDVVKQLLPMGDIFSEVVLLLQDETASRLIDASLRTSEYRPINIF 97
              AKVVSNLPFNISTDVVK LLPMGDIFS+VVLLLQDE A RL++ +LRTSEYRPINI 
Sbjct: 175 SALAKVVSNLPFNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINIL 234

Query: 96  VNFYSDPEYKLKVLRTNFFPQPNVDAAVVAFK 1
           +NFYS+PEY  +V R NFFPQP VDAAVV FK
Sbjct: 235 INFYSEPEYNFRVPRENFFPQPKVDAAVVTFK 266