BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030326
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520241.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_003551380.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    85   8e-15
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    84   1e-14
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7...    84   1e-14
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    83   2e-14

>ref|XP_002520241.1| conserved hypothetical protein [Ricinus communis]
           gi|223540587|gb|EEF42153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 193

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +1

Query: 118 DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
           DRIS LPE +  H++S L   DA++ S+LS+ WR+  T + +L+  +      ++K   L
Sbjct: 13  DRISGLPEPILCHILSSLDTVDAVKSSILSRIWRHNWTSVADLKIHDSLCPNRRSKRAKL 72

Query: 298 A---DFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIG 468
           A    F D++N+ L LH    ++R  + +N A  S   ++SWI  AV HNV++L +S   
Sbjct: 73  AHMKSFVDLLNRVLMLHKHPYIERLSLTLNNA-YSTSDINSWILVAVTHNVEELALSIRN 131

Query: 469 GTIQNLPSCLFTCRTLVVLEL 531
                LP  LFTC +L VL+L
Sbjct: 132 ECTLQLPKILFTCESLKVLKL 152


>ref|XP_003551380.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g00160-like [Glycine
           max]
          Length = 364

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
 Frame = +1

Query: 118 DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
           DRIS+LP+++  H++S +P   A+  SVLSK W+ L   +  L F+  H+      +E  
Sbjct: 3   DRISNLPDVVLSHILSLVPTNVAVATSVLSKRWKLLWRSVSTLNFNHSHHD--DNNHETC 60

Query: 298 ADFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIGGTI 477
           + F   V+  + +HD           ++ P+   H+++WIS A +H V+ L +S   G  
Sbjct: 61  SLFAQRVHAFILMHDMDQPFTRFCLSSSCPLDPIHVNAWISAATQHRVEHLDLSL--GCA 118

Query: 478 QNLPS-CLFTCRTLVVLELFNVRL 546
             LPS  LF+C+TLVVL+L NV L
Sbjct: 119 VELPSFLLFSCKTLVVLKLLNVVL 142


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 51/138 (36%), Positives = 74/138 (53%)
 Frame = +1

Query: 118 DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
           D ISSLPE +  H++SFLP K+A   SVLSK WR L   +PNL+ DE  Y   + + E  
Sbjct: 8   DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67

Query: 298 ADFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIGGTI 477
           + F D V++ L L   S + +F ++I    +    +  WI+  +   V DL +     T 
Sbjct: 68  SSFMDFVDRVLALQGNSPLHKFSLKIGDG-VEPDRIIPWINNVLERGVSDLDLHVYMETE 126

Query: 478 QNLPSCLFTCRTLVVLEL 531
              PS +F  +TLV L+L
Sbjct: 127 FVFPSEMFLSKTLVRLKL 144


>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268114|emb|CAB78451.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1047

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 51/138 (36%), Positives = 74/138 (53%)
 Frame = +1

Query: 118 DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
           D ISSLPE +  H++SFLP K+A   SVLSK WR L   +PNL+ DE  Y   + + E  
Sbjct: 263 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 322

Query: 298 ADFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIGGTI 477
           + F D V++ L L   S + +F ++I    +    +  WI+  +   V DL +     T 
Sbjct: 323 SSFMDFVDRVLALQGNSPLHKFSLKIGDG-VEPDRIIPWINNVLERGVSDLDLHVYMETE 381

Query: 478 QNLPSCLFTCRTLVVLEL 531
              PS +F  +TLV L+L
Sbjct: 382 FVFPSEMFLSKTLVRLKL 399



 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 49/138 (35%), Positives = 69/138 (50%)
 Frame = +1

Query: 118  DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
            D ISSLP+ +  H++SFLP K+A   SVLSK WR L   +PNL+ D+  Y   + + E  
Sbjct: 694  DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 753

Query: 298  ADFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIGGTI 477
              F D V++ L L          VRI            WI+  +   V DL +     + 
Sbjct: 754  TSFMDFVDRVLALQ---------VRI----------IPWINNVLERGVSDLDLHLNLESE 794

Query: 478  QNLPSCLFTCRTLVVLEL 531
              LPS ++ C+TLV L+L
Sbjct: 795  FLLPSQVYLCKTLVWLKL 812


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/138 (36%), Positives = 75/138 (54%)
 Frame = +1

Query: 118 DRISSLPELLRRHLISFLPMKDAIRVSVLSKNWRNLSTCLPNLEFDEEHYKGLKTKNEDL 297
           D ISSLP+ +  H++SFLP K+A   SVLSK WR L   +PNL+ D+  Y   + + E  
Sbjct: 8   DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67

Query: 298 ADFEDMVNQTLNLHDKSDVQRFIVRINTAPISFRHLSSWISFAVRHNVQDLTISRIGGTI 477
             F D V++ L L   S + +F ++I    I    +  WI+  +   V DL +     + 
Sbjct: 68  TSFMDFVDRVLALQGNSPLHKFSLKIGDG-IDPVRIIPWINNVLERGVSDLDLHLNLESE 126

Query: 478 QNLPSCLFTCRTLVVLEL 531
             LPS ++ C+TLV L+L
Sbjct: 127 FLLPSQVYLCKTLVWLKL 144