BLASTX nr result

ID: Coptis25_contig00030320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030320
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [...   126   2e-45
ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [...   126   2e-45
ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [...   126   2e-45
ref|XP_002325024.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-45
ref|XP_002514212.1| transferase, transferring pentosyl groups, p...   131   7e-45

>ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524741|gb|AET05195.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 524

 Score =  126 bits (317), Expect(2) = 2e-45
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   SIYEDSIFIGEISQVWPQLPLLANLRCGLWYSPHFVSTCYFKSTDGHCNNWSFNTSRLNL 182
           SIY+DS+FIGEISQ+WPQLPLLANLRCGLWYS +F STCYFKSTDGH NN SF+TSRLNL
Sbjct: 34  SIYQDSVFIGEISQLWPQLPLLANLRCGLWYSSNFHSTCYFKSTDGHTNNCSFSTSRLNL 93

Query: 183 HVAHLAERR 209
           HVAHLA ++
Sbjct: 94  HVAHLAAQK 102



 Score = 80.9 bits (198), Expect(2) = 2e-45
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = +1

Query: 202 KGGCMIVDSTRRGKRFPDSMSKTIPMWTCVLNRAVASYRRRMQVDGLAVE--CE*SEW 369
           KGGCMIVDSTR+GKRFPDSMSKTIP+WTCVLNRA+A + R   +D  +     E S+W
Sbjct: 102 KGGCMIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDSDW 159


>ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524739|gb|AET05193.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 515

 Score =  126 bits (317), Expect(2) = 2e-45
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   SIYEDSIFIGEISQVWPQLPLLANLRCGLWYSPHFVSTCYFKSTDGHCNNWSFNTSRLNL 182
           SIY+DS+FIGEISQ+WPQLPLLANLRCGLWYS +F STCYFKSTDGH NN SF+TSRLNL
Sbjct: 34  SIYQDSVFIGEISQLWPQLPLLANLRCGLWYSSNFHSTCYFKSTDGHTNNCSFSTSRLNL 93

Query: 183 HVAHLAERR 209
           HVAHLA ++
Sbjct: 94  HVAHLAAQK 102



 Score = 80.9 bits (198), Expect(2) = 2e-45
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = +1

Query: 202 KGGCMIVDSTRRGKRFPDSMSKTIPMWTCVLNRAVASYRRRMQVDGLAVE--CE*SEW 369
           KGGCMIVDSTR+GKRFPDSMSKTIP+WTCVLNRA+A + R   +D  +     E S+W
Sbjct: 102 KGGCMIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDSDW 159


>ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524740|gb|AET05194.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 450

 Score =  126 bits (317), Expect(2) = 2e-45
 Identities = 57/69 (82%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   SIYEDSIFIGEISQVWPQLPLLANLRCGLWYSPHFVSTCYFKSTDGHCNNWSFNTSRLNL 182
           SIY+DS+FIGEISQ+WPQLPLLANLRCGLWYS +F STCYFKSTDGH NN SF+TSRLNL
Sbjct: 34  SIYQDSVFIGEISQLWPQLPLLANLRCGLWYSSNFHSTCYFKSTDGHTNNCSFSTSRLNL 93

Query: 183 HVAHLAERR 209
           HVAHLA ++
Sbjct: 94  HVAHLAAQK 102



 Score = 80.9 bits (198), Expect(2) = 2e-45
 Identities = 38/58 (65%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
 Frame = +1

Query: 202 KGGCMIVDSTRRGKRFPDSMSKTIPMWTCVLNRAVASYRRRMQVDGLAVE--CE*SEW 369
           KGGCMIVDSTR+GKRFPDSMSKTIP+WTCVLNRA+A + R   +D  +     E S+W
Sbjct: 102 KGGCMIVDSTRKGKRFPDSMSKTIPIWTCVLNRAIAQFIRDFHMDDTSAPQLSEDSDW 159


>ref|XP_002325024.1| predicted protein [Populus trichocarpa] gi|222866458|gb|EEF03589.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  120 bits (302), Expect(2) = 3e-45
 Identities = 53/61 (86%), Positives = 56/61 (91%)
 Frame = +3

Query: 3   SIYEDSIFIGEISQVWPQLPLLANLRCGLWYSPHFVSTCYFKSTDGHCNNWSFNTSRLNL 182
           SI EDSIF+GEISQ+WP LPL+ANLRCGLWYSP F STCYFKSTDGH NNWSFNTSRLNL
Sbjct: 31  SINEDSIFVGEISQLWPDLPLIANLRCGLWYSPKFHSTCYFKSTDGHTNNWSFNTSRLNL 90

Query: 183 H 185
           H
Sbjct: 91  H 91



 Score = 86.3 bits (212), Expect(2) = 3e-45
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = +1

Query: 202 KGGCMIVDSTRRGKRFPDSMSKTIPMWTCVLNRAVASYRRRMQVDGLAVECE*SEWAN 375
           KGGC+IVDSTR+GKRFPDSMSKTIP+WTCVLNRA+ +YR +M   GL +  E ++++N
Sbjct: 92  KGGCIIVDSTRKGKRFPDSMSKTIPIWTCVLNRAILNYRNKMLDSGLLMNREVADYSN 149


>ref|XP_002514212.1| transferase, transferring pentosyl groups, putative [Ricinus
           communis] gi|223546668|gb|EEF48166.1| transferase,
           transferring pentosyl groups, putative [Ricinus
           communis]
          Length = 529

 Score =  131 bits (329), Expect(2) = 7e-45
 Identities = 57/69 (82%), Positives = 63/69 (91%)
 Frame = +3

Query: 3   SIYEDSIFIGEISQVWPQLPLLANLRCGLWYSPHFVSTCYFKSTDGHCNNWSFNTSRLNL 182
           SIYEDS+F+GEISQ+WP LPLLANLRCGLWYSP F +TCYFKSTDGH NNWSFNTSRLNL
Sbjct: 30  SIYEDSVFVGEISQLWPDLPLLANLRCGLWYSPEFYATCYFKSTDGHTNNWSFNTSRLNL 89

Query: 183 HVAHLAERR 209
           HVA LA ++
Sbjct: 90  HVAQLAGQK 98



 Score = 74.7 bits (182), Expect(2) = 7e-45
 Identities = 31/43 (72%), Positives = 40/43 (93%)
 Frame = +1

Query: 202 KGGCMIVDSTRRGKRFPDSMSKTIPMWTCVLNRAVASYRRRMQ 330
           KGGC+IVDSTR+GKRFPDSMSKTIP+WTCVLNR++ ++ ++ Q
Sbjct: 98  KGGCIIVDSTRKGKRFPDSMSKTIPIWTCVLNRSILNHVKKKQ 140


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