BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030317
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37820.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   147   7e-34
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   145   3e-33

>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/84 (82%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   ITFVSVLNACAHAGLVDEGRRQFMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVIN 180
           ITF+SVLNACAHAG V EGR  F SM  +FGIEP +EHFASLVDIVGRHG LEEAMD+IN
Sbjct: 357 ITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLIN 416

Query: 181 SMPVEPDRAVWGALLGACRVHNNV 252
           SMP EPD+AVWGALLGACRVHNNV
Sbjct: 417 SMPFEPDKAVWGALLGACRVHNNV 440


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/84 (82%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   ITFVSVLNACAHAGLVDEGRRQFMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVIN 180
           ITF+SVLNACAHAG V EGR  F SM  +FGIEP +EHFASLVDIVGRHG LEEAMD+IN
Sbjct: 534 ITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLIN 593

Query: 181 SMPVEPDRAVWGALLGACRVHNNV 252
           SMP EPD+AVWGALLGACRVHNNV
Sbjct: 594 SMPFEPDKAVWGALLGACRVHNNV 617


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/84 (82%), Positives = 74/84 (88%)
 Frame = +1

Query: 1   ITFVSVLNACAHAGLVDEGRRQFMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVIN 180
           ITF+SVLNACAHAG V EGR  F SM  +FGIEP +EHFASLVDIVGRHG LEEAMD+IN
Sbjct: 534 ITFISVLNACAHAGXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLIN 593

Query: 181 SMPVEPDRAVWGALLGACRVHNNV 252
           SMP EPD+AVWGALLGACRVHNNV
Sbjct: 594 SMPFEPDKAVWGALLGACRVHNNV 617


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 649

 Score =  146 bits (369), Expect = 2e-33
 Identities = 67/84 (79%), Positives = 78/84 (92%)
 Frame = +1

Query: 1   ITFVSVLNACAHAGLVDEGRRQFMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVIN 180
           ITF+SVLNACAHAGLV+EG RQF SM++D+GIEP VEHFASLVDI+GR G L+EAMD+IN
Sbjct: 507 ITFISVLNACAHAGLVEEGWRQFKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIN 566

Query: 181 SMPVEPDRAVWGALLGACRVHNNV 252
           +MP +PD+AVWGALLGACRVHNNV
Sbjct: 567 TMPFKPDKAVWGALLGACRVHNNV 590


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/84 (82%), Positives = 77/84 (91%)
 Frame = +1

Query: 1   ITFVSVLNACAHAGLVDEGRRQFMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVIN 180
           ITF+SVLNACAHAGLV+EGRR F SMVSD+G+EP VEHFASLVDIVGR G LEEA+D+IN
Sbjct: 516 ITFISVLNACAHAGLVEEGRRIFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLIN 575

Query: 181 SMPVEPDRAVWGALLGACRVHNNV 252
           SM +EPD+AVWGALLGA RVHNNV
Sbjct: 576 SMTIEPDKAVWGALLGASRVHNNV 599