BLASTX nr result

ID: Coptis25_contig00030308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030308
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus c...   175   4e-42
ref|XP_002308595.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]      172   3e-41

>ref|XP_002308594.1| predicted protein [Populus trichocarpa] gi|222854570|gb|EEE92117.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  180 bits (457), Expect = 1e-43
 Identities = 86/165 (52%), Positives = 114/165 (69%), Gaps = 4/165 (2%)
 Frame = -3

Query: 557 MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 378
           M ++ Q KW+GK   +LKG TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEG--ELGQPGLV 58

Query: 377 RYC-AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL-- 207
           RYC +G A+           WA E L+ I+P ER L+YEI E+N GF +YVAT+KV    
Sbjct: 59  RYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSPIN 118

Query: 206 -GDNDNQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRME 75
            GD D Q+GC IEWSF+A+P++GW LEDF S + S+L  M K+ME
Sbjct: 119 DGDGDGQHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKME 163


>ref|XP_002336388.1| predicted protein [Populus trichocarpa] gi|222834873|gb|EEE73322.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/169 (49%), Positives = 115/169 (68%), Gaps = 6/169 (3%)
 Frame = -3

Query: 557 MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 378
           M ++ Q KW+GK   +LKG TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQGKWEGKATVELKGPTADQVWPFLEDFCNLQKWLPGVDTCYQVEG--ELGQPGLV 58

Query: 377 RYC-AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL-- 207
           RYC +G A+           WA E L+ I+P ER L+YEI E+N GF +YVAT+K     
Sbjct: 59  RYCSSGTASSDGSHEGNKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKAFPIN 118

Query: 206 ---GDNDNQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRMEEA 69
               D D Q+GC+IEWSF+A+P++GW LEDF S + S+L  M ++ME+A
Sbjct: 119 DGDEDGDGQHGCKIEWSFIADPIEGWPLEDFNSYINSSLQFMGQKMEQA 167


>ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus communis]
           gi|223544341|gb|EEF45862.1| hypothetical protein
           RCOM_0800710 [Ricinus communis]
          Length = 343

 Score =  175 bits (444), Expect = 4e-42
 Identities = 77/165 (46%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
 Frame = -3

Query: 560 LMADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGC 381
           L+ +  ++KW GK   +LKG TADQ+WP   D+CN+ KW P +D+C+ V+G    GQPG 
Sbjct: 175 LLTEISERKWDGKATVELKGLTADQVWPFVADFCNLHKWFPNLDTCYQVEGQL--GQPGL 232

Query: 380 IRYCAGPATPTNDSS-TTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLLG 204
           +RYCA    P++D S  TTF W  E L+ I+P ER L+YE+ +S+MGF++Y AT ++L  
Sbjct: 233 VRYCASVPQPSSDGSGETTFSWVKEKLVMINPDERCLSYEVVDSSMGFESYAATFRLLQV 292

Query: 203 DNDNQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRMEEA 69
           + D Q+GC+IEWSFV++P++ W  +DF++   S L  MAK++E+A
Sbjct: 293 NGDAQHGCKIEWSFVSDPVEAWSFQDFVTYANSCLQFMAKKIEDA 337



 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/162 (45%), Positives = 104/162 (64%), Gaps = 4/162 (2%)
 Frame = -3

Query: 542 QQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCIRYCAG 363
           QQKW+GKV   L  + A+QIWPLF D+ NI KWLP + +C+ + G+   G+ GC+RYCAG
Sbjct: 10  QQKWEGKVSTGLPKAKAEQIWPLFTDFFNIHKWLPTLRTCYGICGT--NGERGCVRYCAG 67

Query: 362 PATP--TNDSS--TTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLLGDND 195
            + P    D S       W+ E L+A+D +ER LTYEI +SN+GF +YV+T+K++     
Sbjct: 68  FSIPPEVTDKSHLNHNSSWSKERLVAVDHVERCLTYEIVDSNIGFKSYVSTVKIVPAGVG 127

Query: 194 NQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRMEEA 69
             NGC IEWSF  +P+KG+ L+D I      L  + KRME++
Sbjct: 128 --NGCVIEWSFQVDPVKGYVLDDLIKKYERALQVIGKRMEDS 167


>ref|XP_002308595.1| predicted protein [Populus trichocarpa] gi|222854571|gb|EEE92118.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  172 bits (437), Expect = 3e-41
 Identities = 83/163 (50%), Positives = 108/163 (66%), Gaps = 3/163 (1%)
 Frame = -3

Query: 551 DDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCIRY 372
           + PQ KW+GK   +LKG TADQIWPL ED+CNI KW P +D C+HV G  + G+PG  RY
Sbjct: 4   ETPQIKWEGKSIVELKGPTADQIWPLLEDFCNINKWFPSIDVCNHVDG--ELGKPGLTRY 61

Query: 371 CAGPATPTNDS-STTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVL--LGD 201
           CA     T  S       W  E LL I+P E+ L+YE+ E+N GF +YVAT+KVL   G 
Sbjct: 62  CASKTLSTYGSYDEAVVRWVKERLLMINPAEKCLSYEVLENNSGFKSYVATMKVLEINGS 121

Query: 200 NDNQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRMEE 72
           +  +NGC+IEWSF+A+P++GW LEDF S +   L +M K ME+
Sbjct: 122 DAGENGCKIEWSFIADPVEGWTLEDFSSFINFCLQSMGKNMEQ 164


>gb|ABK96434.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 171

 Score =  172 bits (437), Expect = 3e-41
 Identities = 82/167 (49%), Positives = 113/167 (67%), Gaps = 6/167 (3%)
 Frame = -3

Query: 557 MADDPQQKWQGKVCAKLKGSTADQIWPLFEDYCNIQKWLPIVDSCHHVKGSPDPGQPGCI 378
           M ++ Q KW+GK   +L+G TADQ+WP  ED+CN+QKWLP VD+C+ V+G  + GQPG +
Sbjct: 1   MTEETQAKWEGKATVELRGPTADQVWPCLEDFCNLQKWLPRVDTCYRVEG--ELGQPGLV 58

Query: 377 RYC---AGPATPTNDSSTTTFGWANENLLAIDPMERYLTYEINESNMGFDNYVATIKVLL 207
           R C     P+  +++       WA E L+ I+P ER L+YEI E+N GF +YVAT+KV  
Sbjct: 59  RCCNFSKVPSEGSHEDEENKVIWAKEKLIMINPSERCLSYEILENNAGFKSYVATMKVSP 118

Query: 206 ---GDNDNQNGCEIEWSFVANPMKGWKLEDFISLLRSNLDTMAKRME 75
              GD D  +GC IEWSF+A+P++GW LEDF S + S+L  M K+ME
Sbjct: 119 INDGDGDGHHGCTIEWSFIADPIEGWPLEDFNSYINSSLQFMGKKME 165


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