BLASTX nr result

ID: Coptis25_contig00030304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030304
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203...   229   1e-58
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]   186   1e-45
emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]   184   8e-45
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   182   2e-44
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   182   2e-44

>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
          Length = 1406

 Score =  229 bits (585), Expect = 1e-58
 Identities = 111/165 (67%), Positives = 136/165 (82%)
 Frame = +1

Query: 1    SKMAHFIPCKKTLDASHVAHLFFKEIVRLHGLPKSIISDRDTKFLSHFWQSLWKRFDTSL 180
            SKMAHFIPCKKT DA ++A+LFF+EIVRLHG+PK+I+SDRD KFLSHFW+SLWK+FDT+L
Sbjct: 1217 SKMAHFIPCKKTFDALNIANLFFREIVRLHGIPKTIVSDRDVKFLSHFWRSLWKKFDTNL 1276

Query: 181  KYSTTCHPQTDG*TEVVNWTLGNLLRSISRGKPKQ*DLALAQAEFTDNNVVNRSTGKSPF 360
             +ST  HPQTDG TEV N TLGNL+R +S  KPKQ DLAL QAEFT N++ NRSTGKSPF
Sbjct: 1277 LFSTASHPQTDGQTEVTNRTLGNLIRCLSGDKPKQWDLALPQAEFTFNHMENRSTGKSPF 1336

Query: 361  QIVYTSVPQHVVDLVPLPKVPGQSVPADHMVEKIVQLHEEVKASL 495
            ++VYTS+P+   DL  LP V   S+ A+ MVE+I +LH+EVK+ L
Sbjct: 1337 EVVYTSLPRVTFDLANLPSVVDVSMEAEAMVERISKLHQEVKSHL 1381


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/165 (56%), Positives = 118/165 (71%)
 Frame = +1

Query: 1   SKMAHFIPCKKTLDASHVAHLFFKEIVRLHGLPKSIISDRDTKFLSHFWQSLWKRFDTSL 180
           SKM HFIPC KTLDA HVA LFFKEIVRLHGLPK+I+SD+D KF+S+FW+SLWK  +T L
Sbjct: 451 SKMVHFIPCSKTLDAVHVAKLFFKEIVRLHGLPKTIVSDQDAKFMSYFWRSLWKMLNTKL 510

Query: 181 KYSTTCHPQTDG*TEVVNWTLGNLLRSISRGKPKQ*DLALAQAEFTDNNVVNRSTGKSPF 360
           K+S+  HPQT+G TEVVN +LG+LLR +        D  L  AEF  N+ VNRSTG SPF
Sbjct: 511 KFSSAFHPQTEGQTEVVNRSLGDLLRCLVGEHVSNWDQILPMAEFAYNSSVNRSTGHSPF 570

Query: 361 QIVYTSVPQHVVDLVPLPKVPGQSVPADHMVEKIVQLHEEVKASL 495
           +IV   +P+  +DLVPLP     SV AD   + I+ LH++V+  +
Sbjct: 571 EIVTGLLPRKPIDLVPLPMEARPSVEADAFSKHILDLHKDVQRKI 615


>emb|CAN68662.1| hypothetical protein VITISV_004407 [Vitis vinifera]
          Length = 605

 Score =  184 bits (466), Expect = 8e-45
 Identities = 89/152 (58%), Positives = 115/152 (75%)
 Frame = +1

Query: 40  DASHVAHLFFKEIVRLHGLPKSIISDRDTKFLSHFWQSLWKRFDTSLKYSTTCHPQTDG* 219
           DAS+VA+LFF+EIVRLHG+P SI SDRD KFLSHFW++LWK FDTSLKYS+T HPQ DG 
Sbjct: 438 DASYVANLFFREIVRLHGIPHSITSDRDVKFLSHFWRTLWKLFDTSLKYSSTSHPQIDGQ 497

Query: 220 TEVVNWTLGNLLRSISRGKPKQ*DLALAQAEFTDNNVVNRSTGKSPFQIVYTSVPQHVVD 399
           TEV N TL N++RS++  KPKQ   AL Q EF  N++ N ST K+PF++VY SVP+H+VD
Sbjct: 498 TEVANRTLSNVIRSVNGDKPKQWGAALPQIEFAFNSMPNHSTKKTPFEVVYASVPRHIVD 557

Query: 400 LVPLPKVPGQSVPADHMVEKIVQLHEEVKASL 495
           L+ LP     +   +  VE+I  +++EVK +L
Sbjct: 558 LIRLPLSHDVNPNVEEFVERIQHIYQEVKKNL 589


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/168 (54%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
 Frame = +1

Query: 1    SKMAHFIPCKKTLDASHVAHLFFKEIVRLHGLPKSIISDRDTKFLSHFWQSLWKRFDTSL 180
            SKMAHFIPCKK  DA HVA LFFKEIVRLHGLP+SI+SDRD KFLSHFW++LW +  T L
Sbjct: 1221 SKMAHFIPCKKVDDACHVADLFFKEIVRLHGLPRSIVSDRDAKFLSHFWRTLWGKIGTKL 1280

Query: 181  KYSTTCHPQTDG*TEVVNWTLGNLLRSISRGKPKQ*DLALAQAEFTDNNVVNRSTGKSPF 360
             +STTCHPQTDG TEVVN TLG LLR++ +   K  +  L   EF  N  V+ +T  SPF
Sbjct: 1281 LFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNLKSWEACLPHVEFAYNRAVHSTTNCSPF 1340

Query: 361  QIVYTSVPQHVVDLVPLPKVP-GQSVPADHMVEKIVQLHEEVKASLNR 501
            +IVY   P   +DL+P+P +   +   A    E + +LHE+VK  + +
Sbjct: 1341 EIVYGFNPLTPLDLLPMPNIAMFKHKDAQAKAEYVKKLHEQVKVQIEK 1388


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 889

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/167 (52%), Positives = 117/167 (70%)
 Frame = +1

Query: 1    SKMAHFIPCKKTLDASHVAHLFFKEIVRLHGLPKSIISDRDTKFLSHFWQSLWKRFDTSL 180
            SKMAHFIPC K+ DA+HVA LFF+EIVRLHG+P +I+SDRDTKFLSHFW++LW +  T L
Sbjct: 634  SKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKL 693

Query: 181  KYSTTCHPQTDG*TEVVNWTLGNLLRSISRGKPKQ*DLALAQAEFTDNNVVNRSTGKSPF 360
             +STTCHPQTDG TEVVN TL  +LR++ +   K  +  L   EF  N+  + +T K PF
Sbjct: 694  LFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNHSQHSTTKKCPF 753

Query: 361  QIVYTSVPQHVVDLVPLPKVPGQSVPADHMVEKIVQLHEEVKASLNR 501
            +IVY  +P+  +DL+PLP     +  A H  E +++LHE  K ++ R
Sbjct: 754  EIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLHETTKENIER 800


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