BLASTX nr result

ID: Coptis25_contig00030297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030297
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270199.2| PREDICTED: alpha-L-fucosidase 2-like [Vitis ...   154   4e-54
ref|XP_002527476.1| conserved hypothetical protein [Ricinus comm...   140   1e-49
dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]             141   6e-49
ref|XP_003610049.1| Macrophage migration inhibitory factor-like ...   143   3e-48
ref|XP_003536603.1| PREDICTED: alpha-L-fucosidase 2-like [Glycin...   134   8e-46

>ref|XP_002270199.2| PREDICTED: alpha-L-fucosidase 2-like [Vitis vinifera]
          Length = 817

 Score =  154 bits (388), Expect(2) = 4e-54
 Identities = 73/102 (71%), Positives = 83/102 (81%)
 Frame = -3

Query: 578 MENGEEWVLVSHPTEQDIWSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGA 399
           ME+GE WVLV  PTE + WSP +  G+D   ++ PLK+RF  PAKHWTDA PIGNGRLGA
Sbjct: 1   MEDGE-WVLVRPPTEIECWSPGWGGGEDEGGSSDPLKVRFFGPAKHWTDALPIGNGRLGA 59

Query: 398 MVWGGVVSETLQLNEDTLWTGVPGNYTNSDAPEALSQVRELV 273
           MVWGGV SETLQLNE TLWTG PGNYTN DAP+ALS+VR+LV
Sbjct: 60  MVWGGVASETLQLNEGTLWTGTPGNYTNPDAPKALSEVRKLV 101



 Score = 84.0 bits (206), Expect(2) = 4e-54
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = -1

Query: 181 RELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSHVAYDVKSYQRELDLDTATV 2
           R+LVD G Y  ATEA  KLS  PSDVYQ LGD+ LEF+DSH+AY  ++Y RELDLDTATV
Sbjct: 98  RKLVDNGDYVAATEAAVKLSGNPSDVYQLLGDINLEFEDSHLAYAEETYSRELDLDTATV 157


>ref|XP_002527476.1| conserved hypothetical protein [Ricinus communis]
           gi|223533116|gb|EEF34874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 849

 Score =  140 bits (354), Expect(2) = 1e-49
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = -3

Query: 578 MENGEEWVLVSHPTEQDIWSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGA 399
           +E   EWV+V  P E+D W P+    ++ +   +PLKI FS PAKHWTDA PIGNGRLGA
Sbjct: 2   IEEDGEWVVVRRPAEKDWWRPSSLIENNDDDEDRPLKIVFSGPAKHWTDAIPIGNGRLGA 61

Query: 398 MVWGGVVSETLQLNEDTLWTGVPGNYTNSDAPEALSQVRELV 273
           MV+GGV SETL++NEDTLWTG PGNYTN +APEAL+QVR+LV
Sbjct: 62  MVFGGVASETLRINEDTLWTGTPGNYTNPNAPEALTQVRKLV 103



 Score = 82.4 bits (202), Expect(2) = 1e-49
 Identities = 39/59 (66%), Positives = 47/59 (79%)
 Frame = -1

Query: 181 RELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSHVAYDVKSYQRELDLDTAT 5
           R+LV   KY EAT    KLS  PS++YQ LGD++LEFDDSH++YD K+YQRELDLDTAT
Sbjct: 100 RKLVGDRKYAEATTEAVKLSGLPSEIYQVLGDIKLEFDDSHLSYDEKTYQRELDLDTAT 158


>dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]
          Length = 854

 Score =  141 bits (356), Expect(2) = 6e-49
 Identities = 70/101 (69%), Positives = 76/101 (75%)
 Frame = -3

Query: 575 ENGEEWVLVSHPTEQDIWSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGAM 396
           E   EWV V  PTE +        G  GE   QPLK+RF EPAKHWTDAAPIGNGRLGAM
Sbjct: 5   EGEGEWVWVRRPTEAEAM------GWAGEEAAQPLKLRFLEPAKHWTDAAPIGNGRLGAM 58

Query: 395 VWGGVVSETLQLNEDTLWTGVPGNYTNSDAPEALSQVRELV 273
           VWGGV +ETLQLN+DTLWTGVPGNYTN DAP  LS+VR+LV
Sbjct: 59  VWGGVPTETLQLNDDTLWTGVPGNYTNPDAPTVLSKVRKLV 99



 Score = 79.0 bits (193), Expect(2) = 6e-49
 Identities = 41/59 (69%), Positives = 45/59 (76%)
 Frame = -1

Query: 181 RELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSHVAYDVKSYQRELDLDTAT 5
           R+LVD GKY EA+ A F LS  PSDVYQPLG + LEF DSHVAY   +YQRELDL TAT
Sbjct: 96  RKLVDDGKYAEASLAAFDLSGHPSDVYQPLGTMNLEFGDSHVAY--SNYQRELDLTTAT 152


>ref|XP_003610049.1| Macrophage migration inhibitory factor-like protein [Medicago
           truncatula] gi|355511104|gb|AES92246.1| Macrophage
           migration inhibitory factor-like protein [Medicago
           truncatula]
          Length = 855

 Score =  143 bits (361), Expect(2) = 3e-48
 Identities = 64/102 (62%), Positives = 84/102 (82%)
 Frame = -3

Query: 578 MENGEEWVLVSHPTEQDIWSPTFNDGDDGETTTQPLKIRFSEPAKHWTDAAPIGNGRLGA 399
           ME+GE W++V  P ++D+W+P+  + DD E +  PLK+ FS  AK+WTDA PIGNGRLGA
Sbjct: 1   MEDGE-WIMVQCPPQKDLWNPSLANADDDEPS-MPLKVTFSRSAKYWTDAIPIGNGRLGA 58

Query: 398 MVWGGVVSETLQLNEDTLWTGVPGNYTNSDAPEALSQVRELV 273
           M+WGG+ SE LQLNEDTLWTG+PGNYT+ +APEAL++VR+LV
Sbjct: 59  MIWGGIQSEVLQLNEDTLWTGIPGNYTDKNAPEALAEVRKLV 100



 Score = 74.7 bits (182), Expect(2) = 3e-48
 Identities = 36/59 (61%), Positives = 42/59 (71%)
 Frame = -1

Query: 181 RELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSHVAYDVKSYQRELDLDTAT 5
           R+LVD  KY EAT A  KL   P +VYQ LGD+ L+FDDSH+ Y  +SY RELDLD AT
Sbjct: 97  RKLVDDRKYSEATTAALKLLGPPGEVYQLLGDIELQFDDSHLKYSEESYHRELDLDNAT 155


>ref|XP_003536603.1| PREDICTED: alpha-L-fucosidase 2-like [Glycine max]
          Length = 877

 Score =  134 bits (337), Expect(2) = 8e-46
 Identities = 62/114 (54%), Positives = 85/114 (74%)
 Frame = -3

Query: 614 FWASNILTTTVFMENGEEWVLVSHPTEQDIWSPTFNDGDDGETTTQPLKIRFSEPAKHWT 435
           F  S  L+ +  +++GE  V+V +  +++ W P+  + +D +   +PLK+ F+EPA HWT
Sbjct: 21  FVVSCSLSLSWAVQDGER-VMVRNTPQKNWWKPSLTNAEDDDPPPRPLKVTFAEPATHWT 79

Query: 434 DAAPIGNGRLGAMVWGGVVSETLQLNEDTLWTGVPGNYTNSDAPEALSQVRELV 273
           DA PIGNGRLGAMVWG V SE LQLNEDTLWTG+PG+YTN  AP+AL++VR+LV
Sbjct: 80  DAIPIGNGRLGAMVWGAVPSEALQLNEDTLWTGIPGDYTNKSAPQALAEVRKLV 133



 Score = 75.9 bits (185), Expect(2) = 8e-46
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = -1

Query: 181 RELVDKGKYPEATEAGFKLSDKPSDVYQPLGDLRLEFDDSHVAYDVKSYQRELDLDTAT 5
           R+LV+  K+ EAT A  KLS +PSDV+Q LGD++LEF DSH+ Y  +SY RELDLDTAT
Sbjct: 130 RKLVNDRKFAEATAAAVKLSGEPSDVFQLLGDIKLEFHDSHLNYSKESYYRELDLDTAT 188


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