BLASTX nr result

ID: Coptis25_contig00030279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030279
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259...   116   2e-24
emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinife...   116   2e-24
ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002523565.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
gb|AFK37699.1| unknown [Lotus japonicus]                               95   5e-18

>ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259450 [Vitis vinifera]
          Length = 154

 Score =  116 bits (290), Expect = 2e-24
 Identities = 75/154 (48%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
 Frame = +2

Query: 8   LAPRISFSNNFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMMAADELFSKGRLLPFKD 187
           ++PRISFSN+F ++QQ +I HE+ +     SSDFEFSV+NY+MM+ADELF KGRLLPFKD
Sbjct: 1   MSPRISFSNDFVESQQ-MIKHERSSREAPVSSDFEFSVTNYSMMSADELFFKGRLLPFKD 59

Query: 188 NCTNQFQPKMTXXXXXXXXXXXXXMAXXXXXXXXXXXXXXRWKELLGLKRNNHIVSKKAD 367
           NCTN  Q K T             +               RWK LLGLKR  HI SKK D
Sbjct: 60  NCTNHSQ-KTTLREELL-------VVDEEEVSRRPPKGSTRWKGLLGLKRT-HIGSKKTD 110

Query: 368 K---------RSMVHEEEAHTSK-SSQEMLTEEG 439
           K         RS++  EEAH  K S+QEML + G
Sbjct: 111 KTDGPMVEGKRSVLVHEEAHVGKTSTQEMLNDGG 144


>emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinifera]
           gi|296082431|emb|CBI21436.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  116 bits (290), Expect = 2e-24
 Identities = 75/154 (48%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
 Frame = +2

Query: 8   LAPRISFSNNFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMMAADELFSKGRLLPFKD 187
           ++PRISFSN+F ++QQ +I HE+ +     SSDFEFSV+NY+MM+ADELF KGRLLPFKD
Sbjct: 18  MSPRISFSNDFVESQQ-MIKHERSSREAPVSSDFEFSVTNYSMMSADELFFKGRLLPFKD 76

Query: 188 NCTNQFQPKMTXXXXXXXXXXXXXMAXXXXXXXXXXXXXXRWKELLGLKRNNHIVSKKAD 367
           NCTN  Q K T             +               RWK LLGLKR  HI SKK D
Sbjct: 77  NCTNHSQ-KTTLREELL-------VVDEEEVSRRPPKGSTRWKGLLGLKRT-HIGSKKTD 127

Query: 368 K---------RSMVHEEEAHTSK-SSQEMLTEEG 439
           K         RS++  EEAH  K S+QEML + G
Sbjct: 128 KTDGPMVEGKRSVLVHEEAHVGKTSTQEMLNDGG 161


>ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|222853053|gb|EEE90600.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  109 bits (272), Expect = 3e-22
 Identities = 72/158 (45%), Positives = 89/158 (56%), Gaps = 14/158 (8%)
 Frame = +2

Query: 8   LAPRISFSNNFADTQQQIINHEKRTPTTSTSSDFEFSVSNYNMMAADELFSKGRLLPFKD 187
           ++PRISFSN+F D+QQ I+  E+ +  T  S+DFEFSV+NY+MM+ADELF KGRLLPFKD
Sbjct: 18  MSPRISFSNDFVDSQQ-IMKQERSSRETPVSTDFEFSVTNYSMMSADELFFKGRLLPFKD 76

Query: 188 NCTNQFQPKMTXXXXXXXXXXXXXMAXXXXXXXXXXXXXXRWKELLGLKRNNHIVSKKAD 367
           N +NQ Q  +                              RWK LLGLKR +HI SKK D
Sbjct: 77  NGSNQMQRTIRDELLVDDD-------EGDEVSPRPPKGSTRWKGLLGLKR-SHIGSKKVD 128

Query: 368 K--------------RSMVHEEEAHTSKSSQEMLTEEG 439
           K                 VHEE  H SKSSQE+++E G
Sbjct: 129 KSEGSMERSVGESRRSGFVHEEVQH-SKSSQEIVSEGG 165


>ref|XP_002523565.1| conserved hypothetical protein [Ricinus communis]
           gi|223537127|gb|EEF38760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  102 bits (254), Expect = 3e-20
 Identities = 71/160 (44%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
 Frame = +2

Query: 8   LAPRISFSNNFADTQQQIINHEKRTPTTS---TSSDFEFSVSNYNMMAADELFSKGRLLP 178
           ++PRISFSN+FAD+QQ II  E+ + + S    S+DFEFSV+NY+MM+ADELF KGRLLP
Sbjct: 19  ISPRISFSNDFADSQQ-IIKQERSSSSRSEAPVSTDFEFSVTNYSMMSADELFFKGRLLP 77

Query: 179 FKDNCTNQFQPKMTXXXXXXXXXXXXXMAXXXXXXXXXXXXXXRWKELLGLKRNNHIVSK 358
           FKDN  N    +M                              RWK LLGLKR +HI SK
Sbjct: 78  FKDNGNNNKSNQMQRTIRDELLVDDDD-GYHGVSHRPPKGSSTRWKGLLGLKR-SHIGSK 135

Query: 359 KADKRSM-------------VHEEEAHTSKSSQEMLTEEG 439
           K DK S                 EE    KSSQE+L+E G
Sbjct: 136 KVDKSSCDGSFGFDQNRRLGFAHEEMDVGKSSQELLSEGG 175


>gb|AFK37699.1| unknown [Lotus japonicus]
          Length = 176

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 62/152 (40%), Positives = 79/152 (51%), Gaps = 10/152 (6%)
 Frame = +2

Query: 8   LAPRISFSNNFADTQQQIINHEKRTPTTS---TSSDFEFSVSNYNMMAADELFSKGRLLP 178
           ++PRISFSN+F D QQ +         TS    SSDFEFS +NY+MM+ADELFSKGRLLP
Sbjct: 19  MSPRISFSNDFVDVQQALKQERNSRSDTSLPVVSSDFEFSTTNYSMMSADELFSKGRLLP 78

Query: 179 FKDNCTNQFQPKMTXXXXXXXXXXXXXMAXXXXXXXXXXXXXXRWKELLGLKRNNHIVSK 358
           +KD+C N  Q +               +               RWK LLGLK+  HI SK
Sbjct: 79  YKDSCNNHNQMQRATTTLKEEL-----LNNDDEYNFSRRPPKGRWKGLLGLKK-YHIGSK 132

Query: 359 KADKRSMVHEEEAHTSK-------SSQEMLTE 433
           K ++     +  A T +       +SQEML E
Sbjct: 133 KVERSEGSSDRGAETRRLASPHNITSQEMLNE 164


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