BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030277
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   282   4e-74
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   281   5e-74
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   276   3e-72
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   273   2e-71
ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|2...   267   1e-69

>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  282 bits (721), Expect = 4e-74
 Identities = 128/203 (63%), Positives = 164/203 (80%)
 Frame = -3

Query: 609 QTRDLNAVHLFLNEVSKKFSIERDIFSLNIAIKGFCDMGFLDSAYLVMIEMEKVGIRPDV 430
           ++RDL A+  FL+E  +KF IE DI S+NI +K FCD GFL+ AYL+M+EMEK+GI+PDV
Sbjct: 152 KSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDV 211

Query: 429 ITYTTLISAFYKENKFEIGNGLWNLMILRRCYPNLTTFNVRIQYLINKTLPWQANKLTSV 250
           +TYTTLISA YK+ + EI NGLWNLM+LR C PNLTTFNVRIQ+LI +   W ANKL  +
Sbjct: 212 VTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKM 271

Query: 249 MQRVGIEPDDMTFNLIIKGFFQAGFADMAKNIYFSLHRKGYKPNCKIYQTMVHYLCKTGD 70
           M+ +GI PD++T+NL+IKGF QAG  DMAK +Y +LH  GYKPN KIYQTM+HYLCK+ D
Sbjct: 272 MRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSED 331

Query: 69  FDLACTLSKYSMSKNWFPSVDTV 1
           F+LA T+ K +M+KNWFP++DT+
Sbjct: 332 FNLAHTICKDAMNKNWFPNIDTI 354


>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  281 bits (720), Expect = 5e-74
 Identities = 126/203 (62%), Positives = 162/203 (79%)
 Frame = -3

Query: 609 QTRDLNAVHLFLNEVSKKFSIERDIFSLNIAIKGFCDMGFLDSAYLVMIEMEKVGIRPDV 430
           Q+ DL A+ LFL +V  KF IE D+FS+NI IK  CDM  L+ AY+VMIEMEK G+ PDV
Sbjct: 157 QSYDLEAIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDV 216

Query: 429 ITYTTLISAFYKENKFEIGNGLWNLMILRRCYPNLTTFNVRIQYLINKTLPWQANKLTSV 250
           +TYTTLISAFYK N++E+GNGLWNLM+++ C PNL TFNVRIQYL+N+   WQAN L  +
Sbjct: 217 VTYTTLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGM 276

Query: 249 MQRVGIEPDDMTFNLIIKGFFQAGFADMAKNIYFSLHRKGYKPNCKIYQTMVHYLCKTGD 70
           M+ +GI PD++T+NL+IKGF QAG+ +MAK +Y +LH KGYKPN KIYQTM+HYLCK G+
Sbjct: 277 MEYLGITPDEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGE 336

Query: 69  FDLACTLSKYSMSKNWFPSVDTV 1
           FD+A T+ K  M++NW  +VDT+
Sbjct: 337 FDMAYTMCKDCMNRNWSLNVDTI 359


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  276 bits (705), Expect = 3e-72
 Identities = 127/203 (62%), Positives = 164/203 (80%)
 Frame = -3

Query: 609 QTRDLNAVHLFLNEVSKKFSIERDIFSLNIAIKGFCDMGFLDSAYLVMIEMEKVGIRPDV 430
           +T DL A+  FL+EV +KF I  DIFS+NI IK FC M  LD AYLVMI+ME++GIRPDV
Sbjct: 153 ETCDLEAIKAFLSEVPEKFDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDV 212

Query: 429 ITYTTLISAFYKENKFEIGNGLWNLMILRRCYPNLTTFNVRIQYLINKTLPWQANKLTSV 250
           +TYTTLISAFYK +++EI NGLWNLM+L+ C PNL+TFNVRIQ+L+N    WQAN++  +
Sbjct: 213 VTYTTLISAFYKNDRWEISNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLL 272

Query: 249 MQRVGIEPDDMTFNLIIKGFFQAGFADMAKNIYFSLHRKGYKPNCKIYQTMVHYLCKTGD 70
           M+R+GI PD++T+NL+IKGF QAG+ +MA+ +Y +LH KGYKPN KIYQTM+H LCK G+
Sbjct: 273 MERIGISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHCLCKGGE 332

Query: 69  FDLACTLSKYSMSKNWFPSVDTV 1
           FDLA T+ K  M K+WF +VDT+
Sbjct: 333 FDLAYTMCKDCMKKSWFLNVDTI 355


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  273 bits (698), Expect = 2e-71
 Identities = 127/202 (62%), Positives = 157/202 (77%)
 Frame = -3

Query: 606 TRDLNAVHLFLNEVSKKFSIERDIFSLNIAIKGFCDMGFLDSAYLVMIEMEKVGIRPDVI 427
           TRDL A+  F+NE  KKF IE DIFS+NI +K  C+ G LD AYL+M+EMEK G+RPDVI
Sbjct: 155 TRDLAAIEAFVNEAPKKFDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVI 214

Query: 426 TYTTLISAFYKENKFEIGNGLWNLMILRRCYPNLTTFNVRIQYLINKTLPWQANKLTSVM 247
           TYTTL+SAFYK N+ EIGNGLWNLM+L+ C PNL TFNVRIQYL+N    W AN +  +M
Sbjct: 215 TYTTLMSAFYKNNRSEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLM 274

Query: 246 QRVGIEPDDMTFNLIIKGFFQAGFADMAKNIYFSLHRKGYKPNCKIYQTMVHYLCKTGDF 67
            ++GI PD++T+NL+IKGFFQ G  +MAK +YFSL  KG+K N K+YQTMVHYLCK G+F
Sbjct: 275 LKIGIVPDEVTYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLCKGGEF 334

Query: 66  DLACTLSKYSMSKNWFPSVDTV 1
           DLA T+ +  M  NWF +VDT+
Sbjct: 335 DLAYTMCRDCMRNNWFLNVDTI 356


>ref|XP_002298105.1| predicted protein [Populus trichocarpa] gi|222845363|gb|EEE82910.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  267 bits (682), Expect = 1e-69
 Identities = 123/202 (60%), Positives = 155/202 (76%)
 Frame = -3

Query: 606 TRDLNAVHLFLNEVSKKFSIERDIFSLNIAIKGFCDMGFLDSAYLVMIEMEKVGIRPDVI 427
           TRDL  +  F+NE  KKF IE DIFS+NI +K  C+ G LD +YL+M+EMEK G+ PDVI
Sbjct: 155 TRDLATIETFVNEAPKKFDIEFDIFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVI 214

Query: 426 TYTTLISAFYKENKFEIGNGLWNLMILRRCYPNLTTFNVRIQYLINKTLPWQANKLTSVM 247
           TYTTL SA+YK NK EIGNGLWNLM+L+ C PNL TFNVRIQYL+N    W AN +  +M
Sbjct: 215 TYTTLTSAYYKNNKAEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLM 274

Query: 246 QRVGIEPDDMTFNLIIKGFFQAGFADMAKNIYFSLHRKGYKPNCKIYQTMVHYLCKTGDF 67
           Q++GI PD++++NL++KGFFQ G  +MAK +YFSL  KG+K N K+YQTMVHYLCK G+F
Sbjct: 275 QKIGIVPDEVSYNLVLKGFFQVGNLEMAKLVYFSLRCKGHKFNVKVYQTMVHYLCKGGEF 334

Query: 66  DLACTLSKYSMSKNWFPSVDTV 1
           DLA T+ +  M  NWF +VDT+
Sbjct: 335 DLAYTMCRDCMRTNWFLNVDTI 356