BLASTX nr result

ID: Coptis25_contig00030267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030267
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis t...   142   3e-32
ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvo...   141   5e-32
emb|CBI28324.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-l...   140   8e-32
ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrat...   140   1e-31

>ref|NP_198547.3| putative endomembrane protein 70 [Arabidopsis thaliana]
           gi|9758717|dbj|BAB09103.1| endosomal protein-like
           [Arabidopsis thaliana] gi|110742157|dbj|BAE99006.1|
           multispanning membrane protein - like [Arabidopsis
           thaliana] gi|332006781|gb|AED94164.1| putative
           endomembrane protein 70 [Arabidopsis thaliana]
          Length = 593

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/86 (74%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = -3

Query: 442 YFQLSVEDHEWWWSSLLRGGSTSVFMYSYC-FIFYGRSSMSGFLQLSFFFGYNACICYAF 266
           YFQL+ EDHEWWW SLL GGST +F+Y+YC + +Y RS MSGF+Q SFFFGY ACICY F
Sbjct: 508 YFQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGF 567

Query: 265 FLMLGTIGFYASLLFVRHIYRVVKLE 188
           FLMLGTIGF ASLLFVRHIYR +K E
Sbjct: 568 FLMLGTIGFCASLLFVRHIYRSIKCE 593


>ref|XP_002952428.1| hypothetical protein VOLCADRAFT_75353 [Volvox carteri f.
           nagariensis] gi|300262364|gb|EFJ46571.1| hypothetical
           protein VOLCADRAFT_75353 [Volvox carteri f. nagariensis]
          Length = 554

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/86 (73%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -3

Query: 442 YFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYG-RSSMSGFLQLSFFFGYNACICYAF 266
           YFQL+VEDH WWW S L GGST +F+Y YCF +Y  RS MSGF+Q SFFFGYNA +CYAF
Sbjct: 469 YFQLAVEDHRWWWRSFLCGGSTGIFVYGYCFYYYYVRSDMSGFMQTSFFFGYNAVVCYAF 528

Query: 265 FLMLGTIGFYASLLFVRHIYRVVKLE 188
           FLMLGT+GF ASLLFVRHIYR +K E
Sbjct: 529 FLMLGTVGFRASLLFVRHIYRAIKCE 554


>emb|CBI28324.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = -3

Query: 442 YFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYGRSSMSGFLQLSFFFGYNACICYAFF 263
           Y QLSVEDHEWWW SLLRGGST++FM+ +C  FY RS MSGF+Q SF+FGYNACICYA F
Sbjct: 552 YVQLSVEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACICYAVF 611

Query: 262 LMLGTIGFYASLLFVRHIYRVVKLE 188
           LMLGTI F ASL+FVR IY  +K E
Sbjct: 612 LMLGTISFRASLMFVRLIYHAIKSE 636


>ref|XP_002274254.1| PREDICTED: putative phagocytic receptor 1b-like [Vitis vinifera]
          Length = 608

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = -3

Query: 442 YFQLSVEDHEWWWSSLLRGGSTSVFMYSYCFIFYGRSSMSGFLQLSFFFGYNACICYAFF 263
           Y QLSVEDHEWWW SLLRGGST++FM+ +C  FY RS MSGF+Q SF+FGYNACICYA F
Sbjct: 524 YVQLSVEDHEWWWRSLLRGGSTAIFMFGHCIYFYARSRMSGFMQFSFYFGYNACICYAVF 583

Query: 262 LMLGTIGFYASLLFVRHIYRVVKLE 188
           LMLGTI F ASL+FVR IY  +K E
Sbjct: 584 LMLGTISFRASLMFVRLIYHAIKSE 608


>ref|XP_002870515.1| transporter [Arabidopsis lyrata subsp. lyrata]
           gi|297316351|gb|EFH46774.1| transporter [Arabidopsis
           lyrata subsp. lyrata]
          Length = 593

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/86 (73%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = -3

Query: 442 YFQLSVEDHEWWWSSLLRGGSTSVFMYSYC-FIFYGRSSMSGFLQLSFFFGYNACICYAF 266
           YFQL+ EDHEWWW SLL GGST +F+Y+YC + +Y RS MSGF+Q SFFFGY ACICY F
Sbjct: 508 YFQLAAEDHEWWWRSLLCGGSTGLFIYAYCLYYYYARSDMSGFMQTSFFFGYMACICYGF 567

Query: 265 FLMLGTIGFYASLLFVRHIYRVVKLE 188
           FLMLG IGF ASLLFVRHIYR +K E
Sbjct: 568 FLMLGAIGFRASLLFVRHIYRSIKCE 593


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