BLASTX nr result

ID: Coptis25_contig00030242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030242
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282446.1| PREDICTED: G-type lectin S-receptor-like ser...   117   7e-25
emb|CAN81803.1| hypothetical protein VITISV_007015 [Vitis vinifera]   115   5e-24
ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CBI21864.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002334056.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>ref|XP_002282446.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At2g19130-like [Vitis vinifera]
          Length = 792

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/101 (59%), Positives = 71/101 (70%)
 Frame = +3

Query: 3   QLGFFTPNSSLNYYIGIWYKNIPTQITVQTVVWVFNRDTPLTDPFSSELKLLENGNLVLF 182
           +LGFF PN+S NYYIGIWYK +P    V TVVWV NR  PL DPFSS+L+L  NGNLV+ 
Sbjct: 53  ELGFFKPNNSQNYYIGIWYKKVP----VHTVVWVANRYKPLADPFSSKLELSVNGNLVVQ 108

Query: 183 NSSKIAIWSTKTTTKAINSSEVVLWDDGNLVLRNRIRPSDV 305
           N SKI +WST   +  +NS+  VL D GNLVLR+R   S V
Sbjct: 109 NQSKIQVWSTSIISSTLNSTFAVLEDSGNLVLRSRSNSSVV 149


>emb|CAN81803.1| hypothetical protein VITISV_007015 [Vitis vinifera]
          Length = 771

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/94 (60%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   QLGFFTPNSSLNYYIGIWYKNIPTQITVQTVVWVFNRDTPLTDPFSSELKLLENGNLVLF 182
           +LGFF PN+S NYYIGIWYK +P    V TVVWV NR  PL DPFSS+L+L  NGNLV+ 
Sbjct: 53  ELGFFKPNNSQNYYIGIWYKKVP----VHTVVWVANRYKPLADPFSSKLELSVNGNLVVQ 108

Query: 183 NSSKIAIWSTKTTTKAINSSEVVLWDDGNLVLRN 284
           N SKI +WST   +  +NS+  VL D GNLVLR+
Sbjct: 109 NQSKIQVWSTSIISSTLNSTFAVLEDSGNLVLRS 142


>ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|222862555|gb|EEF00062.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/99 (55%), Positives = 73/99 (73%)
 Frame = +3

Query: 3   QLGFFTPNSSLNYYIGIWYKNIPTQITVQTVVWVFNRDTPLTDPFSSELKLLENGNLVLF 182
           +LGFF P +S NYYIG+WY     +++ QT+VWV NR+TP++D FSSEL++  +GNL LF
Sbjct: 51  ELGFFKPGNSSNYYIGMWYYR--DKVSAQTIVWVANRETPVSDRFSSELRI-SDGNLALF 107

Query: 183 NSSKIAIWSTKTTTKAINSSEVVLWDDGNLVLRNRIRPS 299
           N SKI IWST  ++ +  S E VL +DGNLVLR+R  PS
Sbjct: 108 NESKILIWSTNLSSSSSRSVEAVLGNDGNLVLRDRSNPS 146


>emb|CBI21864.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/102 (54%), Positives = 68/102 (66%)
 Frame = +3

Query: 3   QLGFFTPNSSLNYYIGIWYKNIPTQITVQTVVWVFNRDTPLTDPFSSELKLLENGNLVLF 182
           +LGFFTP +S NYYIGIWY  +PT+    TVVWV NRD PL+DP SS L+L  +G LVL 
Sbjct: 49  ELGFFTPGNSRNYYIGIWYGRLPTK----TVVWVANRDQPLSDPSSSTLQLSHDGRLVLL 104

Query: 183 NSSKIAIWSTKTTTKAINSSEVVLWDDGNLVLRNRIRPSDVF 308
           N SK  IWST   +   +S+  VL DDGNLV+R     S V+
Sbjct: 105 NQSKTEIWSTDVNSTTPDSTIAVLLDDGNLVVRGGTNSSSVW 146


>ref|XP_002334056.1| predicted protein [Populus trichocarpa] gi|222839677|gb|EEE78000.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/94 (57%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   QLGFFTPNSSLNYYIGIWYKNIPTQITVQTVVWVFNRDTPLTDPFSSELKLLENGNLVLF 182
           +LGFF P +S NYYIG+WY     +++ QT+VWV NRDTP++D FSSEL++   GNL LF
Sbjct: 39  ELGFFHPGNSSNYYIGMWY--CTDKVSKQTIVWVANRDTPVSDRFSSELRI-SGGNLFLF 95

Query: 183 NSSKIAIWSTKTTTKAINSSEVVLWDDGNLVLRN 284
           N SKI IWST   +   +S E VL DDGNLVLR+
Sbjct: 96  NESKIPIWSTNLISSRSSSVEAVLGDDGNLVLRD 129


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