BLASTX nr result

ID: Coptis25_contig00030230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030230
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   153   7e-35
ref|XP_002521366.1| conserved hypothetical protein [Ricinus comm...   143   7e-32
emb|CBI35923.3| unnamed protein product [Vitis vinifera]              139   2e-30
ref|XP_003597554.1| hypothetical protein MTR_2g099520 [Medicago ...   127   5e-27
ref|XP_003546756.1| PREDICTED: uncharacterized protein LOC100811...   117   4e-24

>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score =  153 bits (387), Expect = 7e-35
 Identities = 121/354 (34%), Positives = 166/354 (46%), Gaps = 6/354 (1%)
 Frame = -3

Query: 1114 MEEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPSF 935
            ME DG +  FW        PS    R R  S    LN               +FF VPSF
Sbjct: 1    MEGDGDSPSFWPSPP----PSTSIYRRRRPSP--LLNPAVLIILLPILAMIVVFFAVPSF 54

Query: 934  LSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDD-----VESNGDEGIIASNVV 770
            L+FTSQ  RPN V+KSWDSLN++LVLFAILCG+  RK D+     +E++G  G    +VV
Sbjct: 55   LNFTSQFLRPNSVRKSWDSLNVLLVLFAILCGVFARKNDEKNDDVLENHGSSG----SVV 110

Query: 769  DEQVHEEPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPD 590
              + HE      +    F +S+++I+D    S S    RL+RSSSSYPDLRQES W + D
Sbjct: 111  MGKSHES-----ISHSLFEFSDRKIYDPPIQSGS---VRLRRSSSSYPDLRQESLWGAGD 162

Query: 589  ENWRFFDDSYVYNQRLGSSSVPRQRHRQGAKVVEDSSIKTIRVDTYVNRKQELXXXXXXX 410
            +  RFFDD  V N R  +SS   +RHR+     +DS +K I VDT+  R           
Sbjct: 163  DRRRFFDDFEVNNYRSPASSDYVRRHRRSELERDDSEVKVIPVDTFAVRSS------PSP 216

Query: 409  XXXXXXXXXXXXXXXXPLSEKKPRAQRTYQSVPQKQN-SEIEEMEFKKVQXXXXXXXXXX 233
                            P+ ++KPR  R+Y++V +K+  S  +  +FKK +          
Sbjct: 217  SPAPPRTPPPPPPPPPPIVQRKPR--RSYETVARKEKLSNSDADQFKKSRSPPAPPPPPP 274

Query: 232  XXXXXXXXPEEQTXXXXXXXXXXXXXXXXXXXEIASTLASLYNQRKRKHKQRSR 71
                                            +IA+   SLYNQ ++K KQR++
Sbjct: 275  PPPPPRVPGGH---LPEQKSRKSARRMGGATKDIATVFVSLYNQTRKKKKQRTK 325


>ref|XP_002521366.1| conserved hypothetical protein [Ricinus communis]
            gi|223539444|gb|EEF41034.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 553

 Score =  143 bits (361), Expect = 7e-32
 Identities = 107/308 (34%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
 Frame = -3

Query: 1114 MEEDGQTTPFWLQSSTYFNPSNHHQ--RHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVP 941
            MEE+    PFWLQ++       HH+  R R  +SSI LNSG             +F +VP
Sbjct: 1    MEEEEDVPPFWLQAT-----DQHHRGRRLRRQASSIFLNSGVILIMLLVIAFVFVFVVVP 55

Query: 940  SFLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDV--ESNGDEGIIASNVVD 767
            S ++FTSQVF+PNL+KK WDSLN VLVLFAI+CG LGR   +   ES+     ++S+   
Sbjct: 56   SVVTFTSQVFKPNLIKKGWDSLNFVLVLFAIVCGFLGRNSPNTSNESSTSYQRLSSSSSA 115

Query: 766  EQVHEEPDEQ---PVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWAS 596
               + + D Q   P    +  Y + +  D T + N+    RL RS  SYPDLRQES W++
Sbjct: 116  SSSNVQQDVQRSYPSTPAYRWYDDGQYQDRTASYNT--FNRL-RSFRSYPDLRQESLWSN 172

Query: 595  PDENWRFFDDSYV---------YNQRLGSSSVPRQR--------HRQGAKVVEDSSIKTI 467
             DE WRF+DD+ V         +   L     P+Q+         +Q  +  +D S K I
Sbjct: 173  NDERWRFYDDTRVNGYKFSSPLHQDELQDDHPPQQQQQEQDQEPRKQDQEQEQDVSTKDI 232

Query: 466  RVDTYVNRKQELXXXXXXXXXXXXXXXXXXXXXXXPLSEKKPRAQRTYQSVPQ-KQNSEI 290
             VDT+V  K+E+                         S  K RA+RTY  + + ++  E 
Sbjct: 233  AVDTFVIHKEEVVQTPPPPMPPAPVSPPRLPTR----STVKRRAKRTYHDLGEHEKRREN 288

Query: 289  EEMEFKKV 266
            + +E K +
Sbjct: 289  KNLEVKTI 296


>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  139 bits (349), Expect = 2e-30
 Identities = 124/367 (33%), Positives = 167/367 (45%), Gaps = 9/367 (2%)
 Frame = -3

Query: 1120 QIMEEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVP 941
            + MEE+G TTPFW+ +S+     +  +R   S SSI L+SG             I F++P
Sbjct: 37   ETMEEEGATTPFWMPASS----GHRRRRSSRSPSSIFLSSGFLIIFLPLTALLFIVFVLP 92

Query: 940  SFLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDVESNGDEGIIASNVVDEQ 761
              LSFTS +F+PN+VKKSWDSLNLVLVLFAI+CG L R        G  G   S+ ++  
Sbjct: 93   PILSFTSYIFKPNMVKKSWDSLNLVLVLFAIICGFLSR--------GGGG--GSSDMESS 142

Query: 760  VHEEPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVG-RLKRSSSSYPDLRQESSWASPDEN 584
            V E P+E   +       E+RI        S   G R  RSSSSYPDLRQES+WA  D  
Sbjct: 143  VSEVPEESTQRSNHGHCYEERI--------SGYGGMRRMRSSSSYPDLRQESAWAGGDGR 194

Query: 583  WRFFDDSYVYNQR-LGSSSVPRQRH-RQGAKVVEDSSIKTIRVD-TYVNRKQELXXXXXX 413
            WR FDD+ + N R LGS    RQ + R+  +  +   +K I VD T +   +E       
Sbjct: 195  WRSFDDTQLDNHRVLGSH---RQLYIRRRYEDQDYCEVKNIDVDNTSMISPKEKVLSHIP 251

Query: 412  XXXXXXXXXXXXXXXXXPLSEKKPRAQRTYQSVPQKQNSEIEE---MEFKKVQXXXXXXX 242
                             P    K + +R++Q+V +++  E  E    E K+VQ       
Sbjct: 252  PRPPSPPLPPSPPPPPPPPPVVKRKVKRSFQAVAREERRETRENSSFESKRVQAAPPPPP 311

Query: 241  XXXXXXXXXXXPEEQTXXXXXXXXXXXXXXXXXXXEIASTLASLYNQR--KRKHKQRSRE 68
                                                    L SLY QR  K+K +Q+S E
Sbjct: 312  PPPPPPPPLAVERRS-----------EKSDRKRGGATKEFLTSLYYQRNKKKKQRQKSME 360

Query: 67   NFDDILN 47
            N D IL+
Sbjct: 361  NLDTILH 367


>ref|XP_003597554.1| hypothetical protein MTR_2g099520 [Medicago truncatula]
            gi|355486602|gb|AES67805.1| hypothetical protein
            MTR_2g099520 [Medicago truncatula]
          Length = 485

 Score =  127 bits (319), Expect = 5e-27
 Identities = 87/232 (37%), Positives = 121/232 (52%), Gaps = 5/232 (2%)
 Frame = -3

Query: 1114 MEEDGQ-TTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPS 938
            MEE+ Q ++PFWLQ+S        ++R    S S+ L+SG             I  +VP+
Sbjct: 1    MEEEEQISSPFWLQNS------GTNRRRLSRSYSLFLSSGTVIIVLLVIALAFILVIVPT 54

Query: 937  FLSFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGR--KKDDVESNGDEGIIASNVVDE 764
              SF S +F PN VKKSWDSLNL+LVLFAI CG L +    +   S  D+    S+   +
Sbjct: 55   LHSFASHIFNPNSVKKSWDSLNLLLVLFAIFCGFLSKNNNNESPRSYEDQNQTFSDTNTQ 114

Query: 763  QVHEEPDEQP--VQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPD 590
            Q +E+P+ +P    + W+ YSE R              RL RS +SYPDLRQES W + D
Sbjct: 115  QEYEKPNPEPETAPRFWYEYSEDRTS----------YNRL-RSFNSYPDLRQESLWIAGD 163

Query: 589  ENWRFFDDSYVYNQRLGSSSVPRQRHRQGAKVVEDSSIKTIRVDTYVNRKQE 434
            E WRF DD++V   R    ++  ++        E+ SIK I V T +  K +
Sbjct: 164  EQWRFSDDTHVNRYRGLDLNLKEEKE-------EEESIKDIEVHTSLKGKNK 208


>ref|XP_003546756.1| PREDICTED: uncharacterized protein LOC100811539 [Glycine max]
          Length = 419

 Score =  117 bits (294), Expect = 4e-24
 Identities = 76/217 (35%), Positives = 111/217 (51%)
 Frame = -3

Query: 1111 EEDGQTTPFWLQSSTYFNPSNHHQRHRGSSSSICLNSGXXXXXXXXXXXXXIFFLVPSFL 932
            EE+  + PFW +S          +R    S S+ L+S              +  ++P+  
Sbjct: 5    EEEDTSPPFWTESGG--------RRRLRRSYSLFLSSSAPLICLLVIALAFMLVIIPTLH 56

Query: 931  SFTSQVFRPNLVKKSWDSLNLVLVLFAILCGILGRKKDDVESNGDEGIIASNVVDEQVHE 752
            SFT+Q+F+PN VKKSWDSLN VL+LFAILCG L R      SN +E     +  D  +  
Sbjct: 57   SFTTQIFKPNSVKKSWDSLNFVLILFAILCGFLSRN----NSNTNE-----SFSDTPLEY 107

Query: 751  EPDEQPVQQQWFGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPDENWRFF 572
            +    P+ + W+  S++  + S +           RS SS+PDLRQES W + DE WRF+
Sbjct: 108  DKPNPPLPRPWYEESDRTPYKSYNR---------LRSFSSHPDLRQESQWLAADERWRFY 158

Query: 571  DDSYVYNQRLGSSSVPRQRHRQGAKVVEDSSIKTIRV 461
            DD++V   R G      ++HR  A   E+ S++ I V
Sbjct: 159  DDTHVNGYR-GFDLEEHRQHRTEAG--EEESVENIEV 192


Top