BLASTX nr result

ID: Coptis25_contig00030226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030226
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310496.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
emb|CBI38223.3| unnamed protein product [Vitis vinifera]              103   5e-20
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   103   5e-20
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...   103   5e-20
ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19

>ref|XP_002310496.1| predicted protein [Populus trichocarpa] gi|222853399|gb|EEE90946.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  112 bits (279), Expect = 1e-22
 Identities = 62/137 (45%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
 Frame = +1

Query: 454 YSTKLALFFIVTFVGFFTLFDIQALRXXXXXXXXXXXXXXXXLQHLKTFFTKTYHF---- 621
           YS KL++F +V  V  FTL+ I+ L                      T ++  +H+    
Sbjct: 2   YSPKLSIFLLVLCVSLFTLYHIRFLHAPPS----------------STSWSLMHHWERVT 45

Query: 622 NCSRELEAMASKLQHSVTFLPLKDLRFAHTAMDGNTWFMSSICDDAGEEGETEHLYFPSE 801
           NC++ELE+MA KL+ +VTFLPLKDLR+A TA +G+TWFMSS+  D  EEGE ++  FPSE
Sbjct: 46  NCTQELESMAEKLRQAVTFLPLKDLRYADTAPEGHTWFMSSM-HDTREEGEVQYQQFPSE 104

Query: 802 ASKGRLLCVAGNDSHYG 852
           +SKGRLLC+ G ++H G
Sbjct: 105 SSKGRLLCLKGKETHDG 121


>emb|CBI38223.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  103 bits (257), Expect = 5e-20
 Identities = 57/133 (42%), Positives = 76/133 (57%)
 Frame = +1

Query: 454 YSTKLALFFIVTFVGFFTLFDIQALRXXXXXXXXXXXXXXXXLQHLKTFFTKTYHFNCSR 633
           YS KL+++ +   V  F LF IQ+L                 +        ++   NCS 
Sbjct: 32  YSPKLSVYMLTACVILFILFQIQSLHSPGSPSSSSSSPSWPLIHSWNVVSQESP--NCSH 89

Query: 634 ELEAMASKLQHSVTFLPLKDLRFAHTAMDGNTWFMSSICDDAGEEGETEHLYFPSEASKG 813
           EL A+A KL  +VTFLPLKDLR+A TA  G+TWFMSS+  D   EGE ++  +PS AS+G
Sbjct: 90  ELHALAEKLSDAVTFLPLKDLRYAQTAQQGHTWFMSSM-HDTRVEGEVQYQQYPSAASRG 148

Query: 814 RLLCVAGNDSHYG 852
           RLLC+ G D+H G
Sbjct: 149 RLLCIKGRDTHDG 161


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  103 bits (257), Expect = 5e-20
 Identities = 57/133 (42%), Positives = 76/133 (57%)
 Frame = +1

Query: 454 YSTKLALFFIVTFVGFFTLFDIQALRXXXXXXXXXXXXXXXXLQHLKTFFTKTYHFNCSR 633
           YS KL+++ +   V  F LF IQ+L                 +        ++   NCS 
Sbjct: 32  YSPKLSVYMLTACVILFILFQIQSLHSPGSPSSSSSSPSWPLIHSWNVVSQESP--NCSH 89

Query: 634 ELEAMASKLQHSVTFLPLKDLRFAHTAMDGNTWFMSSICDDAGEEGETEHLYFPSEASKG 813
           EL A+A KL  +VTFLPLKDLR+A TA  G+TWFMSS+  D   EGE ++  +PS AS+G
Sbjct: 90  ELHALAEKLSDAVTFLPLKDLRYAQTAQQGHTWFMSSM-HDTRVEGEVQYQQYPSAASRG 148

Query: 814 RLLCVAGNDSHYG 852
           RLLC+ G D+H G
Sbjct: 149 RLLCIKGRDTHDG 161


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  103 bits (257), Expect = 5e-20
 Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
 Frame = +1

Query: 448 CSYSTKLALFFIVTFVGFFTLFDIQALRXXXXXXXXXXXXXXXXLQHLKTFFTKTYHFNC 627
           C ++ KL++F +   V  FTLF IQ L                 +Q  + F T      C
Sbjct: 29  CFFTPKLSVFLLSICVTLFTLFQIQCLHYPPSLSSPTWSL----MQKWQEFAT-----TC 79

Query: 628 SRELEAMAS-KLQHSVTFLPLKDLRFAHTAMDGNTWFMSSICDDAGEEGETEHLYFPSEA 804
           ++EL++MA  +L+ +VTFLPLKD+R+   A+ G+TWFMSS+ D   EEGE ++  FPSE+
Sbjct: 80  NQELKSMAEMRLKQAVTFLPLKDIRYQEKALQGHTWFMSSMYD-THEEGEVQYQQFPSES 138

Query: 805 SKGRLLCVAGNDSHYG 852
           SKGRLLC+ GND+H G
Sbjct: 139 SKGRLLCLKGNDTHDG 154


>ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  102 bits (253), Expect = 1e-19
 Identities = 60/143 (41%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
 Frame = +1

Query: 448 CSYSTKLALFFIVTFVGFFTLFDIQALRXXXXXXXXXXXXXXXXLQHLKTFFTKTYHF-- 621
           C YS KL++F +   V  FTL+ IQ+L                   H +T  +  + F  
Sbjct: 5   CLYSPKLSIFLLALCVSLFTLYHIQSL-------------------HARTTSSPPWSFVH 45

Query: 622 ------NCSRELEAMASKLQHSVTFLPLKDLRFAHTAMDGNTWFMSSICDDAGEEGETEH 783
                 NC++E  +MA KL+ SVTFLPLKDLR+A  A  G+TWFMSS   D  EEG  ++
Sbjct: 46  QWERFTNCTQEHGSMAEKLRQSVTFLPLKDLRYADKARQGHTWFMSSTY-DTREEGGVQY 104

Query: 784 LYFPSEASKGRLLCVAGNDSHYG 852
             FPSE+SK RLLC+ G ++H G
Sbjct: 105 QQFPSESSKRRLLCLKGKETHDG 127


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