BLASTX nr result

ID: Coptis25_contig00030205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030205
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81645.1| hypothetical protein VITISV_010797 [Vitis vinifera]    63   4e-11
emb|CAN64132.1| hypothetical protein VITISV_013401 [Vitis vinifera]    64   1e-08
pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin...    50   1e-08
ref|XP_002280372.2| PREDICTED: cucumisin-like [Vitis vinifera]         63   3e-08
emb|CBI16047.3| unnamed protein product [Vitis vinifera]               63   3e-08

>emb|CAN81645.1| hypothetical protein VITISV_010797 [Vitis vinifera]
          Length = 668

 Score = 62.8 bits (151), Expect(2) = 4e-11
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +2

Query: 245 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPPQEMER 382
           GF + ++RVP  ESD I+G+LDT IWPE++SFSDEG G  P++ ER
Sbjct: 59  GFPQTVKRVPSIESDIIIGVLDTGIWPESKSFSDEGLGPVPKKXER 104



 Score = 29.6 bits (65), Expect(2) = 4e-11
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +3

Query: 192 IVSVFPSRKYQLHTTRSRD 248
           +VSVFPS   QLHTTRS D
Sbjct: 38  VVSVFPSGILQLHTTRSWD 56


>emb|CAN64132.1| hypothetical protein VITISV_013401 [Vitis vinifera]
          Length = 772

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/84 (45%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
 Frame = +3

Query: 171 GCTGMDGIVSVFPSRKYQLHTTRSRDLEKI*RGFLGKKVTRLWAFSTLESG--QKQGALA 344
           G +GMDG+VSVFPS K QLHTTRS D     R      V        L+ G   +  +  
Sbjct: 121 GVSGMDGVVSVFPSEKKQLHTTRSWDFVGFPRQVKRTSVESDIIIGVLDGGIWPESDSFD 180

Query: 345 MKVLVFPPKKWKGDCVRDSNFTCN 416
            K    PP+KWKG C   SNFTCN
Sbjct: 181 DKGFGPPPRKWKGTCQGFSNFTCN 204


>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
           Endoprotease From Cucumis Melo L gi|400260662|pdb|3VTA|B
           Chain B, Crystal Structure Of Cucumisin, A
           Subtilisin-Like Endoprotease From Cucumis Melo L
          Length = 621

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +2

Query: 245 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPP 367
           GF   + R  + ES+ +VG+LDT IWPE+ SF DEGF  PP
Sbjct: 9   GFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPP 49



 Score = 34.3 bits (77), Expect(2) = 1e-08
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 PPKKWKGDCVRDSNFTCNR 419
           PP KWKG C   +NF CNR
Sbjct: 48  PPPKWKGTCETSNNFRCNR 66


>ref|XP_002280372.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 717

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 245 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPPQE 373
           G  E IER P  ESD IVG++DT IWPE+ SFSDEGFG PP++
Sbjct: 101 GLSETIERKPAVESDVIVGVIDTGIWPESPSFSDEGFGPPPKK 143


>emb|CBI16047.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 245 GFRENIERVPREESDTIVGILDTRIWPEARSFSDEGFGLPPQE 373
           G  E IER P  ESD IVG++DT IWPE+ SFSDEGFG PP++
Sbjct: 89  GLSETIERKPAVESDVIVGVIDTGIWPESPSFSDEGFGPPPKK 131


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