BLASTX nr result

ID: Coptis25_contig00030196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00030196
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329782.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|22354...   117   8e-25
emb|CBI14848.3| unnamed protein product [Vitis vinifera]              117   1e-24
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   117   1e-24
ref|XP_002333803.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|XP_002329782.1| predicted protein [Populus trichocarpa] gi|222870844|gb|EEF07975.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/106 (55%), Positives = 77/106 (72%)
 Frame = -3

Query: 323 LQPISTTEFIFNTFNSSNLTLHGDTTLDEEHNILTLTNNSEYTMGRAFYTSKVPTRTPNT 144
           LQPIS  +F+FN FNSS+++L+G   +  E  ILTLTN + + +GRA + +K+PT+ PN+
Sbjct: 21  LQPISAIDFVFNGFNSSSVSLYGSAII--ESRILTLTNQTSFQIGRALFPTKIPTKAPNS 78

Query: 143 SKIISFYTSFIFSMTPVKGSFPGHGLVFLFSPFATIEGGSSAQNLG 6
           S +  F TSFIF+M P K   PGHGLVFLF PF  I+G SSAQNLG
Sbjct: 79  SFVHPFSTSFIFAMAPYKNVLPGHGLVFLFVPFTGIQGSSSAQNLG 124


>ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|223549367|gb|EEF50855.1|
           kinase, putative [Ricinus communis]
          Length = 728

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/106 (54%), Positives = 76/106 (71%)
 Frame = -3

Query: 320 QPISTTEFIFNTFNSSNLTLHGDTTLDEEHNILTLTNNSEYTMGRAFYTSKVPTRTPNTS 141
           QPI  T+F++N FNSS+L L+G   +  E  IL+LTN + +T+GRA Y SK+ T+ PN+S
Sbjct: 25  QPILATDFVYNGFNSSSLLLYGYAVI--ESRILSLTNETTFTIGRALYPSKIRTKDPNSS 82

Query: 140 KIISFYTSFIFSMTPVKGSFPGHGLVFLFSPFATIEGGSSAQNLGL 3
            +  F TSFIF+M P K   PGHGLVF+F P A IEG ++AQNLGL
Sbjct: 83  YVYPFSTSFIFAMAPYKNVLPGHGLVFIFVPIAGIEGTTTAQNLGL 128


>emb|CBI14848.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/102 (54%), Positives = 73/102 (71%)
 Frame = -3

Query: 311 STTEFIFNTFNSSNLTLHGDTTLDEEHNILTLTNNSEYTMGRAFYTSKVPTRTPNTSKII 132
           S  +F+FN FNSS++ L+G    D E   LTLTN++ + +GRA Y SKVP ++PN+S ++
Sbjct: 22  SAVDFVFNGFNSSDMLLYG--VADIESRFLTLTNHTRFAIGRALYPSKVPAKSPNSSHVV 79

Query: 131 SFYTSFIFSMTPVKGSFPGHGLVFLFSPFATIEGGSSAQNLG 6
            F TSFIFSM P K   PGHG+VFLF+P   IEG +SAQNLG
Sbjct: 80  PFSTSFIFSMAPYKDMIPGHGIVFLFAPVTGIEGTTSAQNLG 121


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/102 (54%), Positives = 73/102 (71%)
 Frame = -3

Query: 311 STTEFIFNTFNSSNLTLHGDTTLDEEHNILTLTNNSEYTMGRAFYTSKVPTRTPNTSKII 132
           S  +F+FN FNSS++ L+G    D E   LTLTN++ + +GRA Y SKVP ++PN+S ++
Sbjct: 22  SAVDFVFNGFNSSDMLLYG--VADIESRFLTLTNHTRFAIGRALYPSKVPAKSPNSSHVV 79

Query: 131 SFYTSFIFSMTPVKGSFPGHGLVFLFSPFATIEGGSSAQNLG 6
            F TSFIFSM P K   PGHG+VFLF+P   IEG +SAQNLG
Sbjct: 80  PFSTSFIFSMAPYKDMIPGHGIVFLFAPVTGIEGTTSAQNLG 121


>ref|XP_002333803.1| predicted protein [Populus trichocarpa] gi|222838541|gb|EEE76906.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/106 (52%), Positives = 74/106 (69%)
 Frame = -3

Query: 323 LQPISTTEFIFNTFNSSNLTLHGDTTLDEEHNILTLTNNSEYTMGRAFYTSKVPTRTPNT 144
           LQPIS  +F+FN FNSS+++L+G   +  E  ILTLTN + + +GRA Y +K+PT+ PN+
Sbjct: 21  LQPISAIDFVFNGFNSSSVSLYGSAII--ESRILTLTNQTSFQIGRALYPTKIPTKAPNS 78

Query: 143 SKIISFYTSFIFSMTPVKGSFPGHGLVFLFSPFATIEGGSSAQNLG 6
           S +  F TSFIF+M P K   PGHGL FLF PF +I+   SAQ LG
Sbjct: 79  SFVYPFSTSFIFAMVPYKNVLPGHGLAFLFVPFTSIQSSISAQYLG 124


Top